DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbl and BRCA1

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_009231.2 Gene:BRCA1 / 672 HGNCID:1100 Length:1884 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631
UBA_Cbl_like 834..873 CDD:270503
BRCA1NP_009231.2 RING 23..68 CDD:238093
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..270
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 306..338
BRCT_assoc 345..507 CDD:289581
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 534..570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 654..709
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1181..1216
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1322..1387
Interaction with PALB2. /evidence=ECO:0000269|PubMed:19369211 1397..1424
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1586..1617
BRCT 1671..1745 CDD:237994
BRCT 1779..1863 CDD:214602
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.