DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and rnf165b

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:XP_005166736.1 Gene:rnf165b / 572413 ZFINID:ZDB-GENE-081104-369 Length:348 Species:Danio rerio


Alignment Length:163 Identity:40/163 - (24%)
Similarity:61/163 - (37%) Gaps:55/163 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 YVTAEGEILQTIPQNKSLCQALLDGHREGFYLYPDGQAYNPDLSSAVQSPTEDHITVTQEQYE-- 357
            |:|:..  |...|:|.:..|.::  |....|.||  |.:...|.|.  ||:. |.|..:|.||  
Zfish   190 YLTSPR--LHHFPRNTTSAQVVV--HEIRNYPYP--QLHLLALQSL--SPSR-HATAVRESYEEL 245

  Fly   358 ---------------------------------LYCEMG------STFQLCKIC---AENDKDIR 380
                                             |..::|      .|.:.|.||   .|:::|:|
Zfish   246 LQLEDRLGNVNRGAVQATIERFTFPHKYKKRRPLELKIGMDEEELDTDEKCTICLSMLEDEEDVR 310

  Fly   381 IEPCGHLLCTPCLTSWQVDSEGQGCPFCRAEIK 413
            ..||.||....|:..|.  :..:.||.||.:|:
Zfish   311 RLPCMHLFHQACVDQWL--ATNKKCPICRVDIE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176 12/44 (27%)
zf-C3HC4_3 367..415 CDD:290631 17/50 (34%)
UBA_Cbl_like 834..873 CDD:270503
rnf165bXP_005166736.1 zf-RING_2 296..337 CDD:290367 14/42 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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