DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cbl and CG6923

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster


Alignment Length:506 Identity:111/506 - (21%)
Similarity:175/506 - (34%) Gaps:170/506 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 EDHITVTQEQYELYCEMGSTFQLCKICAENDKDIRIEPCGHLLCTPCLTSWQVDSEGQGCPFCRA 410
            |:|     .||.:|...           :.|.:      |::|.||.|:|.|..|..:..|...|
  Fly    32 ENH-----SQYAMYYNQ-----------QRDSE------GYMLMTPFLSSSQSHSHTRSPPTYTA 74

  Fly   411 EIKGTEQIVVDAFDPRKQHNRNVTNGRQQQQEEDDTEDIG----DFNIATSSLHALST------- 464
            .:           :||::.:... .|..::.::..:.| |    :..:|:||.:|.||       
  Fly    75 MV-----------EPRREESSGF-EGLARRCDKCSSLD-GLCRCESMVASSSRYADSTQNQSHSE 126

  Fly   465 -------SSTVAAEKHSP--HTSPRLGRRSTTPSLMAVQND--------LYAGGTPTLSLPSSSC 512
                   ||:.||..:.|  |:.||..|:.|.|..|..::|        ..:|..|..::...:.
  Fly   127 AQFLEQPSSSTAAIANPPAVHSIPRPKRKKTEPLTMEPESDNDGDAVVASVSGTWPAGAIEEHAM 191

  Fly   513 SSIAAASTSSSSSLASVATVAASTSSSQHQQPQPSAPPA-SAVLSNGGGGGGGGGASSSQKNTNR 576
            .|.|......||||      ..|.||.   :..|||..| ..|.|:......|..|.:...||..
  Fly   192 DSTAVVYEVPSSSL------QLSNSSF---ETAPSAVNAYDDVTSSASDTEHGQFAHTRTTNTTT 247

  Fly   577 MSAPLIGSCVANSTYGQKLPQNCSHSSTSSSSDNASSSSSYAILQNLHDT-GTPATAAAVVAPPL 640
            .::.:                 .:|...:|.|:|||::||.|:     || .||:|:|       
  Fly   248 TTSAV-----------------QAHKKKASRSNNASNTSSRAV-----DTDATPSTSA------- 283

  Fly   641 PPRKSSPGVETPSKATAPPPPSSSKSIDNIQCSLDNVPPQTTAPPIPPHVSPSVDTLAEDLMRQQ 705
            ..||......:..|:....|.:.| |.|.....:.|        |:|| :.|:|          .
  Fly   284 QSRKRQMSQFSYRKSRVLEPENES-SDDGWDLRVHN--------PVPP-IEPTV----------T 328

  Fly   706 LIATSTTSPVLSLLDEDIVEVGPAETISGVIDTRPLEARGVTLCRQDSASSHYTQLCTTSSGGSA 770
            :|..|..|        |..|:|..:                        .::|...|..     |
  Fly   329 IIRGSRGS--------DEAEIGHTD------------------------HNYYNSRCAV-----A 356

  Fly   771 AALANGKKANSAKQSQATTTTSA----------AAAAATAGNGSNPGQQSQ 811
            .|..:.....||..|.||.||.:          :||..:....|:..|:.|
  Fly   357 GAPPDSTYIRSASCSTATHTTRSVDYGSRIGRRSAATGSPSTSSDQEQEQQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631 11/47 (23%)
UBA_Cbl_like 834..873 CDD:270503
CG6923NP_001262484.1 zf-rbx1 <1185..1228 CDD:289448
zf-RING_2 1187..1228 CDD:290367
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.