DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and Brca1

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:NP_033894.3 Gene:Brca1 / 12189 MGIID:104537 Length:1812 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631
UBA_Cbl_like 834..873 CDD:270503
Brca1NP_033894.3 rad18 15..>172 CDD:273165
RING-HC_BRCA1 18..65 CDD:319412
RING-HC finger (C3HC4-type) 24..64 CDD:319412
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..198
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 321..362
BRCT_assoc 342..503 CDD:372330
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..581
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 640..767
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 864..899
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 947..995
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1030..1056
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1147..1185
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1205..1230
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1244..1289
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1313..1343
Interaction with PALB2. /evidence=ECO:0000250 1353..1380
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1437..1547
BRCT_BRCA1_rpt1 1593..1689 CDD:349367
BRCT_BRCA1_rpt2 1700..1797 CDD:349353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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