DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cbl and rnf5

DIOPT Version :9

Sequence 1:NP_648224.1 Gene:Cbl / 38961 FlyBaseID:FBgn0020224 Length:878 Species:Drosophila melanogaster
Sequence 2:XP_003200552.1 Gene:rnf5 / 100537822 ZFINID:ZDB-GENE-100805-3 Length:205 Species:Danio rerio


Alignment Length:90 Identity:28/90 - (31%)
Similarity:41/90 - (45%) Gaps:2/90 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 STFQLCKICAENDKDIRIEPCGHLLCTPCLTSW-QVDSEGQGCPFCRAEIKGTEQIVVDAFDPRK 427
            :||: |.||.:..:|..|..||||.|.|||..| :.....|.||.|:|.|...:.|.:.......
Zfish    43 ATFE-CNICLDTARDAVISLCGHLFCWPCLHQWLETRPSRQQCPVCKAGISRDKVIPLYGRGSSS 106

  Fly   428 QHNRNVTNGRQQQQEEDDTEDIGDF 452
            |.:..:....:.|.:..:.|..|.|
Zfish   107 QEDPRLKTPPRPQGQRSEPESRGPF 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CblNP_648224.1 Cbl_N 42..163 CDD:280432
Cbl_N2 167..250 CDD:280857
SH2_Cbl-b_TKB 244..340 CDD:198176
zf-C3HC4_3 367..415 CDD:290631 20/48 (42%)
UBA_Cbl_like 834..873 CDD:270503
rnf5XP_003200552.1 PLN03208 45..>141 CDD:178747 27/88 (31%)
RING 46..91 CDD:238093 19/45 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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