DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oseg1 and Ift122

DIOPT Version :10

Sequence 1:NP_648221.3 Gene:Oseg1 / 38957 FlyBaseID:FBgn0265102 Length:1169 Species:Drosophila melanogaster
Sequence 2:XP_006506860.1 Gene:Ift122 / 81896 MGIID:1932386 Length:1242 Species:Mus musculus


Alignment Length:1252 Identity:553/1252 - (44%)
Similarity:798/1252 - (63%) Gaps:113/1252 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRGVLKWLERIEFPNSKDNEISVHNVCYAPDGSQLVVAAGDRLLIYDPNDGSLLNTLKAHKDTVN 65
            ||.||.|.::.        |..::::.:.|||:||::|||:|||:||.:||:||..||.|||||.
Mouse     1 MRAVLTWRDKA--------EQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVY 57

  Fly    66 CVAYSRDGKRFASGASDKMVIVWSPQLEGLLKYSHGDSIQCMSFNPVSHHLASCSLSDFAFWSAD 130
            ||||::||||||||::||.:|:|:.:|||:|||:|.|||||:|:|||:|.|||||.|||..||.:
Mouse    58 CVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWSPE 122

  Fly   131 QKAVQKYKISARVNGCSWTNDGQYLILGLANGTISIRNKLGEEKGRIDRPGGPNSNVFSVQCCPA 195
            ||:|.|:|.|:::..||||||||||.||:|||.||||||.||||.:|:||||..|.::|:...|:
Mouse   123 QKSVSKHKSSSKITCCSWTNDGQYLALGMANGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPS 187

  Fly   196 S------------------------------------GPGSV----------------------D 202
            |                                    ..||.                      |
Mouse   188 SRWETIWMSRENEDAEDVIVNKYVQEIPSILKSTVYNSQGSEAEEEEQEEEDDSPRDGNSEEHND 252

  Fly   203 TIGVVDWSQTLSFHTLSGQMIGKERTLGFDPLCLQYFPNGEFCLVGGCTGGLHFFTREGIRLGTL 267
            .:.|.||.|.|||:.|||:.|||:|.|.|||.|:.||..||:.||||....:..||::|:||||:
Mouse   253 ILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILVGGSDKQVSLFTKDGVRLGTV 317

  Fly   268 GDTFDTWIWTVALHPNGQSYTIGCQDGTLACFNIASSTVHALYRERYAFRENMCDVIIQHLISGQ 332
            |:. ::|:||..:.|:.....:||||||::.:.:..||||.||::|||:|::|.|||:||||:.|
Mouse   318 GEQ-NSWVWTCRVKPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQ 381

  Fly   333 KVRIKCRDLVQKIAIYRNRLAVQLPERVVLYELSSGEDQPMHYKVREKIQQKFDCSLLVVCGRHI 397
            |||||||:||:|||||:||||:||||::::|||.|.:...|||:|:|||.:||:|:|||||..||
Mouse   382 KVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSEDSTDMHYRVKEKIVKKFECNLLVVCADHI 446

  Fly   398 VLCQEKRLQCLDFMGVLQREWIMDSFIRYIKVTGGPVGREGLMVGLKNGQVFRIFLNNSLPLLIT 462
            :||||||||||.|.||.:|||.|:|.||||||.|||.|||||:|||||||:.:||::|...:::.
Mouse   447 ILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPAGREGLLVGLKNGQILKIFVDNLFAIVLL 511

  Fly   463 TAVSAVRCLDINSKRSKIAVVDDVGRLVVRDVINDTILYQDTGVNSVTWNTHLDSMLCYTHTTGG 527
            ...:||||||:::.|:|:||||:....:|.|:....:|:|:...|||.|||..:.|||:   :||
Mouse   512 KQATAVRCLDMSASRNKLAVVDENDTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCF---SGG 573

  Fly   528 --LSVRVGNLPPRAPQNMHGVVVGLCGATAFCLRGNIMHNTPLALGSTMWQFIEAGLFDEAYQVA 590
              |:::....|.. .|.:.|.|||..|:..|||....|....:...:.|:|:::..:|.||||:|
Mouse   574 GYLNIKASTFPVH-QQKLQGFVVGYNGSKIFCLHVFSMSAVEVPQSAPMYQYLDRKMFKEAYQIA 637

  Fly   591 CLGVTTSDWEGLAQSALEALHINIARDAYVKVRNLPWLKLIGELRDQQQRSAVPKEVLLAENCAF 655
            |||||.:||..||..|||.|....||.|:.:|::|.:|:||..:.::::|.....::.||:..::
Mouse   638 CLGVTDADWRELAMEALEGLEFETARKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSY 702

  Fly   656 AGKFKEAARLFLKCGQSSRALEMYTDLRMFDLAQEYIKDGTDQEKKELVRKRAEWAYSVKEPRAA 720
            .|||.|||:|:.:.|..:.||:|||||.||:.|::::..|..:|.|.|:.|:|:||.::.||:||
Mouse   703 QGKFHEAAKLYKRSGHENLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAA 767

  Fly   721 AELLLSAGENQKAIDIVAEQGWADVLYDIGRRLSLTERDSLESVAQNLKTLKALPLAAEIFKKLG 785
            .|:.:||||:.|||:|....||.|:|.||.|:|...||:.|...|...|.|.:...|||.:.|:|
Mouse   768 VEMYISAGEHAKAIEISGSHGWVDMLIDIARKLDKAEREPLLMCACYFKKLDSPGYAAETYLKIG 832

  Fly   786 DEAQVVQLHIEVRDWPEAFRLAESLPELLPTVHYQHGQWLAETDQFIEAHQAYIKAGRTKEANRL 850
            |...:|||:::.:.|.|||.|.|..||....|:..:.|||||.|:|.||.:|:.||||..||.|:
Mouse   833 DLKSLVQLYVDTKRWDEAFALGEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQGEAVRV 897

  Fly   851 LKQLSNTAIVEERYLDASYFYWLLAKQHLDVYHAKEEQNPVDHHLTEYKNHLRVAKVYYAYSVIY 915
            |:||::.|:||.|:.||:|:||:|:.|.||:..|...|.  |..|.::.:...:|::|:.|..|:
Mouse   898 LEQLTHNAVVESRFNDAAYYYWMLSMQCLDMAQADPAQK--DAMLDKFHHFQHLAELYHGYQTIH 960

  Fly   916 SYMKEPFTTHSPVSLFNVSRFILNEVEHKGVPKGVSMFSVLFTLAKQAKFLQANKLCLLINKRLQ 980
            .|.:|||:...|.:|||:|:|:|:.:. |..|.|:|..:.|||||||:|.|.|.||......:|:
Mouse   961 RYTEEPFSFDLPETLFNISKFLLHSLT-KATPLGISKVNTLFTLAKQSKALGAYKLARHAYDKLR 1024

  Fly   981 SLKPPAGVQEQIDLNFLNSKACKSGFNDPEELLPLCYKCSNYSQHLNS--NCCPTCRQDYIFSFV 1043
            .|:.||.:|:.|:|..|..::  ..|:|.|||:||||:||..:..||:  |.|..|||.:|||..
Mouse  1025 GLQIPARIQKSIELGTLTIRS--KPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSAS 1087

  Fly  1044 SFEILPLVQFYPEVDISDAEAERL--LLAPAKHAE------------------------DSDP-- 1080
            |:|:|.||:||.|..|:|.||..|  |.||....|                        :.||  
Mouse  1088 SYEVLHLVEFYLEEGITDEEAVALIDLEAPRHKREGKWRETSSNNSQTLKLDETMDSIGEDDPFT 1152

  Fly  1081 ----FNEDVASALPLSLDRNGLRAIDPNHVLILKRRGKNVRNVYYRNILPDLQVTYCPQCLLLFY 1141
                |.:..:..:|:.::|:.||::....||| ||....::..|:|::|||..:|.||.|..:|:
Mouse  1153 AKLSFEQGSSEFVPVVVNRSVLRSMSRRDVLI-KRWPPPLQWQYFRSLLPDASITMCPSCFQMFH 1216

  Fly  1142 AEDFELQVLQKGHCPFC 1158
            :||:||.|||...||:|
Mouse  1217 SEDYELLVLQHACCPYC 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg1NP_648221.3 WD40 <22..296 CDD:441893 154/331 (47%)
WD40 repeat 25..59 CDD:293791 18/33 (55%)
WD40 repeat 65..99 CDD:293791 21/33 (64%)
WD40 repeat 104..136 CDD:293791 21/31 (68%)
WD40 repeat 144..214 CDD:293791 41/127 (32%)
WD40 repeat 233..267 CDD:293791 16/33 (48%)
WD40 repeat 275..301 CDD:293791 9/25 (36%)
LapB 654..910 CDD:442196 110/255 (43%)
Ift122XP_006506860.1 WD40 <15..350 CDD:441893 155/335 (46%)
WD40 repeat 15..51 CDD:293791 18/35 (51%)
WD40 repeat 57..91 CDD:293791 21/33 (64%)
WD40 repeat 96..128 CDD:293791 21/31 (68%)
WD40 repeat 136..172 CDD:293791 26/35 (74%)
WD40 repeat 283..317 CDD:293791 16/33 (48%)
LapB 694..918 CDD:442196 100/223 (45%)

Return to query results.
Submit another query.