DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oseg1 and Wdr19

DIOPT Version :9

Sequence 1:NP_001286982.1 Gene:Oseg1 / 38957 FlyBaseID:FBgn0265102 Length:1169 Species:Drosophila melanogaster
Sequence 2:NP_001346808.1 Gene:Wdr19 / 213081 MGIID:2443231 Length:1341 Species:Mus musculus


Alignment Length:1396 Identity:262/1396 - (18%)
Similarity:456/1396 - (32%) Gaps:445/1396 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GSQLVVAA-GDRLLIYDPNDGSLLNTLKAHKDTVNCVAYSRDGKRFASGASDKMVIVWSPQLEGL 95
            ||.|.|.. ...||||:......:..|..|...:.|..::.: ...|.|..|||:.|.:.:    
Mouse   109 GSFLAVGTIKGNLLIYNHQTSRKIPVLGKHTKKITCGCWNSE-NLLALGGEDKMITVSNQE---- 168

  Fly    96 LKYSHGDSIQCMSFNPVSHHLA----SCSLSDFAFWSAD--------QKAVQKYKISARVNG--- 145
                 ||:|:   ..||....:    |.|.:|....||:        :|.:..:.::...|.   
Mouse   169 -----GDTIR---QTPVKSEPSDIKFSMSKTDERISSAENTISAVVGKKMLFLFHLNEPDNPVDL 225

  Fly   146 ----------C-SWTNDGQYLILGLANGT-ISIRNKLGEEKGRIDRPGGPNSNVFSVQCCPASGP 198
                      | ||..|| |:::|.:.|| ::|.....|....|.:......|:.||..      
Mouse   226 EFQQAYGNIVCYSWYGDG-YIMIGFSRGTFLAISTHFPEVGQEIFKARDHKDNLTSVAL------ 283

  Fly   199 GSVDTIGVVDWSQTLSFHTLSGQMIGKERTLGFDPLCLQYFPNGEFCLVGGCTGGLHFFTR---- 259
                       ||||:          |..|.|.:  |::                :|..|.    
Mouse   284 -----------SQTLN----------KAATCGDN--CIK----------------IHDLTELRDM 309

  Fly   260 --------EGIRLGTLGDTFDTWIWTVALHPNGQSYTIGCQDGTLACF----NIASSTVHALYRE 312
                    |...||||.       ||    .:||...:..|.|:|..|    .|.....|.    
Mouse   310 YAIINLDDENKGLGTLS-------WT----DDGQLLALSTQRGSLHVFLTKLPILGDACHT---- 359

  Fly   313 RYAFRENMCDVIIQHLISGQ---KVRIKCRDLVQKIAIYRNRLAVQLPERVVLYELSSGEDQPMH 374
            |.|:..::.:|.:.:||.|:   .|.:........:.:|  .|||.:..|...|           
Mouse   360 RIAYLTSLLEVTVANLIEGEPPITVSVDVEPTFVAVGLY--HLAVGMNNRAWFY----------- 411

  Fly   375 YKVREKIQQKFDCSLLVVCGRHIVLCQEKRLQCLDFMGVLQREWIMDSFIRYIKVTGGPVGREGL 439
                             |.|.::|    |:|:.::::|.:....:...:                
Mouse   412 -----------------VLGENVV----KKLKDVEYLGTVASICLHSDY---------------- 439

  Fly   440 MVGLKNGQVFRIFLNNSLPLLITTAVSAVRCLDINSKRSK--IAVVDDVGRLVVRDVINDTILY- 501
            ...|..|::....:.|.:             ||...:|..  ...|||..|::...:.:|.::| 
Mouse   440 AAALFEGKIQLHLIENEM-------------LDAQEERETRLFPAVDDKCRILCHALTSDFLIYG 491

  Fly   502 QDTGVNSVTWNTHLDSMLCYTHTTG--------------------------GLSVRVGNLPPRAP 540
            .|||:....:......:..|.|..|                          .::.....:|..:|
Mouse   492 TDTGIIHYFFIEDWQFVNDYRHPVGVKKLFPDPNGTRLVFIDEKSDGFVYCPVNDATYEIPDFSP 556

  Fly   541 --------------------------------QNMHGVVVGLCGATAF---------------C- 557
                                            ..:.|..|.|.|:|..               | 
Mouse   557 TIKGVLWENWPMDKGVFIAYDDDKVYTYAFHKDTIQGSKVILAGSTKLPFSHKPLLLYNGELTCQ 621

  Fly   558 ---------------LRGNIMHNTPLALGSTMWQFIEAGLFDEAYQVACLGVTTSDWEGLAQSAL 607
                           ..|::....|..|...:.|.:....|.:|:.:..:....:.|..||::.|
Mouse   622 TQSGKINSIYLSTHSFLGSMKDTEPTDLRQMLTQTLLLKRFSDAWDICKMLNDRTSWSELAKACL 686

  Fly   608 EALHINIARDAYVKVRNLPWLKLIGELRDQQQRSAVPKEVLLAENCA-FAGKFKEAARLFLKCGQ 671
            ..:.:..|      :|....:..:|.:...:|...:....|||.:.| |...|..|..|:|....
Mouse   687 HHMEVEFA------IRVSRTMGDVGTVMSLEQIKGIEDYNLLAGHLAMFTNDFNLAQDLYLASNC 745

  Fly   672 SSRALEMYTDLRMFD----LAQEYIKDGTDQEKKE----------LVRKRAEWAYSVKEPRAAAE 722
            ...||||..||:.:|    ||:....|......||          .|...|.:...:.......:
Mouse   746 PVAALEMRRDLQHWDSALQLAKRLAPDQIPFISKEYAIQLEFTGDYVNALAHYEKGITGDNKEHD 810

  Fly   723 LLLSAGENQKAIDIVAEQGWADVLYDIGRRLSLTERDSLESVAQNLKTLKALPLAAEIFKKLGDE 787
            .:..||..|.:|.:      .|:.....:.|....|.........|:.:|....||::::|....
Mouse   811 EVCLAGVAQMSIRM------GDIRRGANQALKHPSRVLKRDCGAILENMKQFSEAAQLYEKGQYY 869

  Fly   788 AQVVQLHIEVRDWPEAFRLAESLPEL-LPTVHYQHGQWLAETDQFIEAHQAYIKAGRTKEANRL- 850
            .:...::|..::|.   ::.|.||.: .|.:|.|:.:......::.||..||..|.:.....|: 
Mouse   870 DRAASVYIRCKNWA---KVGELLPHVSSPKIHLQYAKAKEADGRYKEAVVAYENAKQWNSVIRIY 931

  Fly   851 LKQLSN----TAIVEE-RYLD-----ASYFYWL---------------------LAKQH------ 878
            |..|:|    .:||.| :.||     |.:|..|                     ||:||      
Mouse   932 LDHLNNPEKAVSIVRETQSLDGAKMVARFFLQLGDYGSAIQFLVLSKCNNEAFTLAQQHNKMEIY 996

  Fly   879 LDVYHAKEEQNPVDHHLTEY----KNHLRVAKVYY---AYS-VIYSYMKEPFTTHSPVSLFNVS- 934
            .|:..|::..|.....:..|    |.|.:..|.:.   .|| .:..::|      .|.|..||: 
Mouse   997 ADIIGAEDTTNEDYQSIALYFEGEKRHFQAGKFFLLCGQYSRALKHFLK------CPSSEDNVAI 1055

  Fly   935 ------------RFILNEV------EHKGVPKGVSMFSVLFTLAKQAKFLQANKLCLLINK---- 977
                        ..:.|::      |..|:||.......|:...||  :.:|.:..::|.:    
Mouse  1056 EMAIETVGQAKDELLTNQLIDHLMGESDGMPKDAKYLFRLYMALKQ--YREAARTAIIIAREEQS 1118

  Fly   978 ------------------RLQSLKPPAGVQEQIDLNFLNSKA-----CKSG--FNDPEELLPLCY 1017
                              :.|.:|.|:  :...:|..|:|..     .|||  ......|:.:..
Mouse  1119 AGNYRNAHDVLFSMYAELKAQKIKIPS--EMATNLMILHSYILVKIHVKSGDHMKGARMLIRVAN 1181

  Fly  1018 KCSNYSQH----LNS---NCCPTCRQDYIFSFVSFEILPLVQFYPEVDISDAEAERLLLAPAKHA 1075
            ..|.:..|    |.|   .|.....::..|||.:..:.|  ::..::   ||:.::.:.|..:..
Mouse  1182 NISKFPSHIVPILTSTVIECHRAGLKNSAFSFAAMLMRP--EYRNKI---DAKYKKKIEAMVRRP 1241

  Fly  1076 EDSDPFNEDVASALPLSLDRNGLRAIDPNHVLILKRRG-KNVRNVYY-----RNILPDLQVTYCP 1134
            :.|:  .|:..:..|.      .:.:.|...|:..  | ||  |:.|     |::|.| ..|.||
Mouse  1242 DTSE--TEEATTPCPF------CQFLLPECELLCP--GCKN--NIPYCIATGRHMLKD-DWTMCP 1293

  Fly  1135 QCLLLFYAEDFELQVLQKGHCPFCHTSSEKL 1165
            .|.......:|::.:..:..||.|   ||:|
Mouse  1294 HCGFPALYSEFKILLNSESTCPMC---SERL 1321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oseg1NP_001286982.1 WD40 <8..307 CDD:225201 68/318 (21%)
WD40 22..296 CDD:295369 65/303 (21%)
WD40 repeat 25..59 CDD:293791 9/27 (33%)
WD40 repeat 65..99 CDD:293791 7/33 (21%)
WD40 repeat 104..136 CDD:293791 9/43 (21%)
WD40 repeat 144..214 CDD:293791 19/84 (23%)
WD40 repeat 233..267 CDD:293791 6/45 (13%)
WD40 repeat 275..301 CDD:293791 8/29 (28%)
TPR_hemY_coli <598..789 CDD:273126 43/205 (21%)
Wdr19NP_001346808.1 WD 1 11..51
WD40 <19..345 CDD:225201 66/305 (22%)
WD40 repeat 20..55 CDD:293791
WD 2 52..92
WD40 repeat 57..93 CDD:293791
WD 3 95..134 8/24 (33%)
WD40 repeat 101..136 CDD:293791 8/26 (31%)
WD 4 137..175 11/50 (22%)
WD40 repeat 181..226 CDD:293791 7/44 (16%)
WD40 repeat 235..272 CDD:293791 12/37 (32%)
WD 5 273..311 13/82 (16%)
WD40 repeat 278..314 CDD:293791 12/80 (15%)
WD 6 317..356 14/49 (29%)
WD40_3 508..564 CDD:318183 5/55 (9%)
TPR 1 736..769 12/32 (38%)
TPR 755..1045 CDD:223533 60/298 (20%)
TPR 2 775..808 4/32 (13%)
TPR repeat 779..803 CDD:276809 4/23 (17%)
TPR repeat 808..844 CDD:276809 7/41 (17%)
TPR 3 840..873 6/32 (19%)
Clathrin <851..964 CDD:330899 28/115 (24%)
TPR 4 895..928 8/32 (25%)
TPR 5 951..984 5/32 (16%)
TPR 6 1020..1053 8/38 (21%)
DZR 1253..1296 CDD:315449 14/53 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.