DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mkg-p and Mtpap

DIOPT Version :9

Sequence 1:NP_001286981.1 Gene:mkg-p / 38955 FlyBaseID:FBgn0035889 Length:659 Species:Drosophila melanogaster
Sequence 2:XP_038951672.1 Gene:Mtpap / 307050 RGDID:1310900 Length:584 Species:Rattus norvegicus


Alignment Length:416 Identity:106/416 - (25%)
Similarity:174/416 - (41%) Gaps:101/416 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QLRQRLNAIT-KLFNSAQSQS--ERQELREALEWSES-GGHLCTVLNFFACDLENMK----TC-- 104
            :|:...|.:: :.|..|.|||  ..::|.|.|.::|| ...|..:|..|....||::    ||  
  Rat   152 KLKNPSNQVSGQSFVQADSQSPPSSKKLFELLSYAESIDAQLTALLKAFQLTEENVRLRHLTCSL 216

  Fly   105 -----FGHVRNCIEKEMRGRVRVFPFGSLVTGLALKESDIDLF--LEPNGNQPP-------LFHN 155
                 ..:..:|:         |:||||.|........|:|:|  |:..||...       |...
  Rat   217 IEDIAAAYFPSCV---------VWPFGSSVNTFGKLGCDLDMFLDLDETGNLSDHKNTGNFLMEF 272

  Fly   156 QLYNKTSHFLRRSKCFA--------------DVFTIRHASVPIIRCKHQLTGLNIDINMSNPNSI 206
            |:.|..|..:...|..:              .|..|.:|..|::|..||.:|...|:..:|..::
  Rat   273 QVKNVPSERVATQKILSVIGECLDNFGPGCVGVQKILNARCPLVRFSHQGSGFQCDLTANNSIAL 337

  Fly   207 YNSRFVGELMF----RNERIRELCLFLKIWAKKLKLISH---GGMTSYCLISLIIVNLQVNR--L 262
            .:|    ||::    .:.|:|.|...::.||:...|.|.   ..:|::.|..::|..||...  :
  Rat   338 KSS----ELLYIYGSLDSRVRALVFGVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPI 398

  Fly   263 VPSVKELQSLCPP---VILSGVNYAYSLDLTPPIPARLT-TLD-LLKNFFIYYCTVNFDKSVLSP 322
            :|::..|:|:...   .||.|.|..:..|:....|:..| ||: |||.||.|:....|:|:.::.
  Rat   399 LPTLDSLKSMADAEDRCILEGNNCTFIQDINKIKPSGNTETLELLLKEFFEYFGNFAFNKNSINI 463

  Fly   323 FLGGCVDKETTLGMPGGFPEYDEQQKLVHDAIGAPPDAFQLDRAMCVQDPFELSRNVAKSVSISN 387
            ..|                  .||.|         ||:..|    .:|:|||.|.|::|:||.:.
  Rat   464 RQG------------------REQNK---------PDSSPL----YIQNPFETSLNISKNVSQNQ 497

  Fly   388 LCYFRQCLVLAAQAC--SDQELTSQP 411
            |..|   :.||..:.  .:||...||
  Rat   498 LQKF---VELARDSAWILEQEKKDQP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mkg-pNP_001286981.1 NT_PAP_TUTase 104..216 CDD:143392 31/141 (22%)
MtpapXP_038951672.1 RL 63..132 CDD:407669
TRF4 184..>496 CDD:227585 88/355 (25%)
NT_PAP_TUTase 209..347 CDD:143392 33/150 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

Return to query results.
Submit another query.