DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mkg-p and cid13

DIOPT Version :9

Sequence 1:NP_001286981.1 Gene:mkg-p / 38955 FlyBaseID:FBgn0035889 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_593157.1 Gene:cid13 / 2543204 PomBaseID:SPAC821.04c Length:578 Species:Schizosaccharomyces pombe


Alignment Length:397 Identity:100/397 - (25%)
Similarity:158/397 - (39%) Gaps:86/397 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SERQELREALEWSESGGHLCTVLNFFACDLENMKTCFGHVRNCIEKEMRGR-VRVFPFGSLVTGL 132
            |:..||.:::..::||             ||........:...::||...: ::...|||..:.|
pombe    53 SQLYELYDSIILNDSG-------------LERRYAFVQKLEQILKKEFPYKNIKTSLFGSTQSLL 104

  Fly   133 ALKESDIDLFLEPNGNQPPLFHNQLYNKTSHFLRRSKCFADVFTIRHASVPIIRCKHQLTGLNID 197
            |...|||||.:.   ..||.........::.|.|..  ...|..|..|.|||::.......|:.|
pombe   105 ASNASDIDLCII---TDPPQCAPTTCEVSAAFARNG--LKKVVCISTAKVPIVKVWDSELQLSCD 164

  Fly   198 INMSNPNSIYNSRFVGELMFRNERIRELCLFLKIWAKK--LKLISHGG-MTSYCLISLIIVNLQV 259
            .|::...|..|:|.:...:..:.|:|.|.:.:|.|||:  |...:.|| :||| .||.:::|.  
pombe   165 CNINKTISTLNTRLMRSYVLCDPRVRPLIVMIKYWAKRRCLNDAAEGGTLTSY-TISCMVINF-- 226

  Fly   260 NRLVPSVKELQSLCPPVILSGVNYAYSLDLTPPIPARLTTLDLLKNFFIYYCTVNFDKSVLSPFL 324
                     ||...||::       .||.:.|.:....|..|.|...|       ||...|   :
pombe   227 ---------LQKRDPPIL-------PSLQMLPHLQDSSTMTDGLDVSF-------FDDPDL---V 265

  Fly   325 GGCVDK-ETTLGMPGGFPE--------YDEQQKLVHDAIG------APPDAFQLDRAMCVQDPFE 374
            .|..|| |.:||:.  |.|        :|.:..::....|      |....|||:..:||::||.
pombe   266 HGFGDKNEESLGIL--FVEFFRFFGYLFDYEHFVLSIRHGTFLSKRAKGWQFQLNNFLCVEEPFH 328

  Fly   375 LSRNVA--------KSVSISNLCYFRQCLVLAAQACSDQELTSQPEKLYDYLLFGLADKLVADKI 431
            .|||:|        |.:.:.    ||:...|.|..|:..:..||      :....|.|....|..
pombe   329 TSRNLANTADEITMKGIQLE----FRRVFRLLAYNCNVDDACSQ------FTFPSLTDTSFMDDY 383

  Fly   432 VADKRSE 438
            |.:.:.|
pombe   384 VNELQLE 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mkg-pNP_001286981.1 NT_PAP_TUTase 104..216 CDD:143392 28/112 (25%)
cid13NP_593157.1 TRF4 1..545 CDD:227585 100/397 (25%)
NT_PAP_TUTase 71..183 CDD:143392 28/116 (24%)
PAP_assoc 275..331 CDD:281779 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12271
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2580
TreeFam 1 0.960 - -
54.870

Return to query results.
Submit another query.