DRSC/TRiP Functional Genomics Resources

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Protein Alignment mkg-p and rde-3

DIOPT Version :10

Sequence 1:NP_648219.1 Gene:mkg-p / 38955 FlyBaseID:FBgn0035889 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_491834.1 Gene:rde-3 / 187005 WormBaseID:WBGene00003499 Length:441 Species:Caenorhabditis elegans


Alignment Length:412 Identity:88/412 - (21%)
Similarity:143/412 - (34%) Gaps:131/412 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KHASKPQKQLRQRLNAITKLFNSAQ-----SQSERQELREALEWSESGGHLCTVLNFFACDLENM 101
            |...|.|:.||...:....|..|.|     ::..::|..:.::|                     
 Worm    27 KFNGKFQRVLRDHEDDFNILSISMQDHFDTTKQPKEEFGKKMDW--------------------- 70

  Fly   102 KTCFGHVRNCIEK-EMRGRVRVFPFGSLVTGLALKESDIDLFLEPNGNQPPLFHNQLYNKTSHFL 165
              |: .::|.|.| .......:.|.||.|||||.|.||:|:.:          |.....:.....
 Worm    71 --CY-QLKNIISKNNPTWLFNIVPTGSTVTGLATKNSDLDVAI----------HIPQAARVLEQE 122

  Fly   166 RRSKCFADVFTIRHAS--------VPIIRCKHQ-----------------------------LTG 193
            .|.:...|  ..|.||        :.|:|...|                             :.|
 Worm   123 ERGRNITD--DERQASWREIQLEILQIVRLNLQNDEQINSRINWEHGIQLVQAQIQILKVMTVDG 185

  Fly   194 LNIDINMSNP---NSIYNSRFVGELMFRNERIRELCLFLKIWA--KKLKLISHGGMTSYCLISLI 253
            ::.||::...   :|::||..:..|...:.|...||..:|.||  .|:|....||..||.|:.|:
 Worm   186 IDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQWAASTKVKDPKDGGFNSYALVLLV 250

  Fly   254 IVNLQVNRLVPSVKELQSLCP------------PVILSGVNYAYSLDLTPPIP------ARLTTL 300
            |..||.....|.:..||.:..            |.||:     :...|..|:|      |.|..|
 Worm   251 IHFLQCGTFPPILPNLQEIFKKDNFIAWDDKVYPSILN-----FGAPLPKPLPRIAPNNAPLARL 310

  Fly   301 DLLKNFFIYYCTVNFDKSVLSPFLGGCVDKETTLGMPGGFPEYDEQQKLVHDAIGAPPDAFQLDR 365
            .:  .|..||...||.::.:.......:|:.|:            |..:|..:         .::
 Worm   311 FI--EFLYYYSMFNFKENYIGARPVMVMDRRTS------------QNNMVRSS---------TNK 352

  Fly   366 AMCVQDPFELSRNVAKSVSISN 387
            .:|:||||: ..|..::|...|
 Worm   353 EVCIQDPFD-EHNPGRTVRTLN 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mkg-pNP_648219.1 NT_PAP_TUTase 104..216 CDD:143392 31/152 (20%)
rde-3NP_491834.1 TRF4 74..>376 CDD:227585 77/341 (23%)

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