DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon66Cii and Ctrb1

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_079859.2 Gene:Ctrb1 / 66473 MGIID:88559 Length:263 Species:Mus musculus


Alignment Length:273 Identity:87/273 - (31%)
Similarity:130/273 - (47%) Gaps:43/273 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEGKAPYTVGLGFSGGW-WCGGS 68
            ::..|| |.:..|..:|     .:.||.|.  ..||.||..|..|..|:.|.|....|: :||||
Mouse     7 VSCFAL-VGATFGCGVP-----AIQPVLTG--LSRIVNGEDAIPGSWPWQVSLQDRTGFHFCGGS 63

  Fly    69 IIAHDWVLTAEHC---------------IGDADSVTVYFGATWRTNAQFTHWVGNGNFIKHSSAD 118
            :|:.:||:||.||               ..|.::|.|...|....|.:|     |...:::   |
Mouse    64 LISENWVVTAAHCGVKTTDVVVAGEFDQGSDEENVQVLKIAQVFKNPKF-----NSFTVRN---D 120

  Fly   119 IALIRI-PHVDFWHMVNKVELPSYNDRYNDYNEWWAVA-CGWGGT-YDGSPLPDYLQCVDLQIIH 180
            |.|::: ....|...|:.|.||:.:|   |:......| .|||.| |:....||.||...|.|:.
Mouse   121 ITLLKLATPAQFSETVSAVCLPTVDD---DFPAGTLCATTGWGKTKYNALKTPDKLQQAALPIVS 182

  Fly   181 NSECSGYYGS-VGDNILCVRTPDGKSTCGGDSGGPLVTH-DGT-KLVGVTNFGSVAGCQSGAPAG 242
            .::|...:|| :.|.::|... .|.|:|.||||||||.. ||. .|.|:.::|| ..|.:..||.
Mouse   183 EAKCKESWGSKITDVMICAGA-SGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGS-GFCSTSTPAV 245

  Fly   243 FQRVTYHLDWIRD 255
            :.|||..:.|:::
Mouse   246 YARVTALMPWVQE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 78/235 (33%)
Tryp_SPc 40..256 CDD:238113 78/238 (33%)
Ctrb1NP_079859.2 Tryp_SPc 33..256 CDD:214473 78/235 (33%)
Tryp_SPc 34..259 CDD:238113 78/238 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.