DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon66Cii and Tpsab1

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:279 Identity:88/279 - (31%)
Similarity:126/279 - (45%) Gaps:52/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEGKAPYTVGLGFSGGWW---CG 66
            :.:|:..|.:|....|||              :| |..|..|...|.|:.|.|..:..:|   ||
  Rat    46 LPLLSSLVHAAPSLAMPR--------------EG-IVGGQEASGNKWPWQVSLRVNDTYWMHFCG 95

  Fly    67 GSIIAHDWVLTAEHCIG----DADSVTV-------YFGATWRTNAQFTHWVGNGNF-IKHSSADI 119
            ||:|...|||||.||:|    |.:.:.|       |:.....|.:|.   :.:.:| |....|||
  Rat    96 GSLIHPQWVLTAAHCVGPNKADPNKLRVQLRKQYLYYHDHLLTVSQI---ISHPDFYIAQDGADI 157

  Fly   120 ALIRIPH-VDFWHMVNKVELPSYNDRYNDYNEWWAVACGWGGTYD--GSPLPDYLQCVDLQIIHN 181
            ||:::.: |:....|:.|.||..::.:......|..  |||...:  ..|.|..|:.|.:.|:.|
  Rat   158 ALLKLTNPVNITSNVHTVSLPPASETFPSGTLCWVT--GWGNINNDVSLPPPFPLEEVQVPIVEN 220

  Fly   182 SECSGYYG---SVGDNILCVRTP------DGKSTCGGDSGGPLV--THDGTKLVGVTNFGSVAGC 235
            ..|...|.   :.|||:..||..      :|..:|.||||||||  ..|.....||.::|.  ||
  Rat   221 RLCDLKYHKGLNTGDNVHIVRDDMLCAGNEGHDSCQGDSGGPLVCKVEDTWLQAGVVSWGE--GC 283

  Fly   236 -QSGAPAGFQRVTYHLDWI 253
             |...|..:.||||:||||
  Rat   284 AQPNRPGIYTRVTYYLDWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 79/243 (33%)
Tryp_SPc 40..256 CDD:238113 81/244 (33%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 79/242 (33%)
Tryp_SPc 66..302 CDD:238113 79/242 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.