DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Cii and Cfd

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001071110.1 Gene:Cfd / 54249 RGDID:2498 Length:263 Species:Rattus norvegicus


Alignment Length:280 Identity:75/280 - (26%)
Similarity:116/280 - (41%) Gaps:54/280 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAFIAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEGKAPYTVGLGFSGGWWC 65
            |.:.:.::||.|..|:              |.....:|||..|..|.....||...:..:|...|
  Rat     1 MHSSVYLVALVVLEAA--------------VCVAQPRGRILGGQEAMAHARPYMASVQVNGTHVC 51

  Fly    66 GGSIIAHDWVLTAEHCIGDADSVT------VYFGATWRTNAQ-FTHWVGNGNFIKHSSA------ 117
            ||:::...|||:|.||:   |.||      |..||...::.: :.|.....:.:.|..:      
  Rat    52 GGTLVDEQWVLSAAHCM---DGVTKDEVVQVLLGAHSLSSPEPYKHLYDVQSVVLHPGSRPDSVE 113

  Fly   118 -DIALIRI-------PHVDFWHMVNKVELP-SYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQC 173
             |:.|.::       |||.        .|| ...||.........|| |||........||.||.
  Rat   114 DDLMLFKLSHNASLGPHVR--------PLPLQREDREVKPGTLCDVA-GWGVVTHAGRRPDVLQQ 169

  Fly   174 VDLQIIHNSECS--GYY-GSVGDNILCVRTPDGKSTCGGDSGGPLVTHDGTKLVGVTNFGSVAGC 235
            :.:.|:..:.|:  .|: |::..|::|..: :.:.||.||||||||..|..:  .|..:||....
  Rat   170 LTVSIMDRNTCNLRTYHDGAITKNMMCAES-NRRDTCRGDSGGPLVCGDAVE--AVVTWGSRVCG 231

  Fly   236 QSGAPAGFQRVTYHLDWIRD 255
            ....|..|.||..::.||.:
  Rat   232 NRRKPGVFTRVATYVPWIEN 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 66/238 (28%)
Tryp_SPc 40..256 CDD:238113 67/241 (28%)
CfdNP_001071110.1 Tryp_SPc 26..252 CDD:238113 67/241 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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