DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Cii and CG3505

DIOPT Version :10

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:237 Identity:57/237 - (24%)
Similarity:88/237 - (37%) Gaps:63/237 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CGGSIIAHDWVLTAEHCIGDADSVTVYFGAT----WRTNAQFTHWVGNGNFIKHSSA-------- 117
            |||.:|:..:||||.||:..|.:..:...|.    |.|:.       |.:...|..:        
  Fly   137 CGGVLISDRYVLTAAHCVAQAATSNLQITAVRLGEWDTST-------NPDCQYHEDSKVADCAPP 194

  Fly   118 ------------------------DIALIRIPHV----DFWHMVNKVELPSYNDRYNDYNEWWAV 154
                                    ||||:|:...    ||   |..:.||:...|.::..:....
  Fly   195 YQDIAIEELLPHPLYNRTDRTQINDIALVRLASPAKLNDF---VQPICLPNKQLRADELEDLVTE 256

  Fly   155 ACGWGGTYDGSPLPDYLQCVDLQIIHNSECSGYYGS----VGDNILCVRTPDGKSTCGGDSGGPL 215
            ..||..:........|:....::     ||...|.|    :..:.||..|  ....|.|::||||
  Fly   257 VAGWQASSSQRMRKGYVTISSIE-----ECQRKYASQQLRIQASKLCGLT--NSQECYGNAGGPL 314

  Fly   216 V--THDGTKLVGVTNFGSVAGCQSGAPAGFQRVTYHLDWIRD 255
            :  .:||..|.|:.:||.|.......|..:.||..::|||.|
  Fly   315 MLFKNDGYLLGGLVSFGPVPCPNPDWPDVYTRVASYIDWIHD 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 40..256 CDD:238113 57/237 (24%)
CG3505NP_650380.2 CLIP 32..82 CDD:463440
Tryp_SPc 111..356 CDD:238113 56/235 (24%)
Blue background indicates that the domain is not in the aligned region.

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