DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Cii and CG4477

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_648295.1 Gene:CG4477 / 39058 FlyBaseID:FBgn0035971 Length:315 Species:Drosophila melanogaster


Alignment Length:273 Identity:68/273 - (24%)
Similarity:115/273 - (42%) Gaps:60/273 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PRLATEKLTPVHTKDMQGRITNGYPAEEGKA--PYTVGLG-------FSGGWWCGGSIIAHDWVL 76
            ||.|...|..|.      |:::|...|:..|  .|.|.|.       |....:|.|.|:|..:|:
  Fly    25 PRNAFSSLNRVK------RLSDGDFDEDSIALSNYCVSLRSRSAEKFFGDNHFCSGVILAPMFVM 83

  Fly    77 TAEHCIGD------ADSVTVYFGAT-----WRTNAQF----TH-WVGNGNFIKHSSADIALIRI- 124
            |:.||:.:      :..|.:....|     :..|..|    || |:.: :|...:..|..|::: 
  Fly    84 TSAHCLINKRRVLISSRVLLIVAGTLNRLKYIPNRTFVTPVTHIWLPD-SFTMRNKQDFGLLKVK 147

  Fly   125 -------PHVDFWHMVNKVELPSYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNS 182
                   .|:....:.....||....:          ..|||..|.|.||..|:..:|:|:|.:.
  Fly   148 NPFPRNNEHISIARLPVHPPLPGLKCK----------VMGWGRMYKGGPLASYMLYIDVQVIDSE 202

  Fly   183 ECSGY--YGSVGDNILCVRTPD--GKSTCGGDSGGPLVTHDGTKLVGVTNFGSVAGC-QSGAPAG 242
            .|:.:  ..|| :::..|.:.|  .:..||||.|.|:: |:|| :.|:...  :||| .|..|:.
  Fly   203 ACAKWLRVPSV-EHVCAVDSDDLTAQQPCGGDWGAPML-HNGT-VYGIVTI--LAGCGVSHLPSL 262

  Fly   243 FQRVTYHLDWIRD 255
            :..|..:.:||.:
  Fly   263 YTNVHSNANWIHE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 61/251 (24%)
Tryp_SPc 40..256 CDD:238113 62/254 (24%)
CG4477NP_648295.1 Tryp_SPc 55..276 CDD:238113 58/237 (24%)
Tryp_SPc 55..273 CDD:214473 56/233 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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