DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Cii and tmprss4b

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:246 Identity:68/246 - (27%)
Similarity:101/246 - (41%) Gaps:49/246 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 QGRITNGYPAEEGKAPYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVTVYFGATWRTNAQ 101
            :.||..|........|:.|.|.|:....||||:::..|:::|.||.            |.||. :
Zfish   199 EDRIVGGVETSIEHWPWQVSLQFNHRHMCGGSLLSTSWIISAAHCF------------TGRTQ-E 250

  Fly   102 FTHW---VGNGNFIKHSSADIALIRIPHVDFWHMVNKVE--------------------LPSYND 143
            .:.|   :|....:......:.:|.| |.|:..:.|..:                    ||.:..
Zfish   251 LSRWTVVLGQTKVMDVVGVSVDMIVI-HKDYNRLTNDFDIAMLKLTWPVKTGESILPVCLPPHQL 314

  Fly   144 RYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECSG---YYGSVGDNILCVRTPDGK- 204
            ...|    ..|..|||...:|..||..||...:.:::.||||.   |..|:...:||.....|. 
Zfish   315 AIKD----MLVVTGWGLLKEGGALPTVLQKASVPLVNRSECSKPTIYSSSITPRMLCAGFLQGNV 375

  Fly   205 STCGGDSGGPLV-THDGTKLVGVTNFGSVAGC-QSGAPAGFQRVTYHLDWI 253
            ..|.|||||||| .....:|:|:.::|  .|| :.|.|..:..||..||||
Zfish   376 DACQGDSGGPLVYLSSRWQLIGIVSWG--VGCAREGKPGVYADVTQLLDWI 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 66/242 (27%)
Tryp_SPc 40..256 CDD:238113 67/243 (28%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133
SRCR 105..>175 CDD:278931
Tryp_SPc 201..424 CDD:214473 66/242 (27%)
Tryp_SPc 202..427 CDD:238113 67/243 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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