DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon66Cii and CG8952

DIOPT Version :10

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_573072.1 Gene:CG8952 / 32525 FlyBaseID:FBgn0030688 Length:276 Species:Drosophila melanogaster


Alignment Length:280 Identity:90/280 - (32%)
Similarity:135/280 - (48%) Gaps:37/280 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAILALAVASASGATMPRLATEKLTPVHTKDMQ--GRITNGYPAEEGKAPYTVGLGFSGGW---W 64
            :.::.||..|..|        :...|.::..::  .||.:|..|:.|:.|:.|.|. ...|   .
  Fly     9 LMLVLLAAISVVG--------QPFDPANSSPIKIDNRIVSGSDAKLGQFPWQVILK-RDAWDDLL 64

  Fly    65 CGGSIIAHDWVLTAEHCIGDADSVTVYFGATWRTNAQFTHWVGNGNFIKHS------SADIALIR 123
            ||||||:..|||||.||.....|:.:.||.....||...:...| |.|.|.      :.|::||:
  Fly    65 CGGSIISDTWVLTAAHCTNGLSSIFLMFGTVDLFNANALNMTSN-NIIIHPDYNDKLNNDVSLIQ 128

  Fly   124 IPH-VDFWHMVNKVEL-PSYNDRYNDYNEWWAVACGWGGTYDGSPLPDY---LQCVDLQIIHNSE 183
            :|. :.|...:..::| ..|.|.. ||....|...|:|.|.|  ...||   |....::||.|::
  Fly   129 LPEPLTFSANIQAIQLVGQYGDSI-DYVGSVATIAGFGYTED--EYLDYSETLLYAQVEIIDNAD 190

  Fly   184 CSGYYGS--VGDNILCVRTPDGK--STCGGDSGGPLVTHDGT----KLVGVTNFGSVAGCQSGAP 240
            |...||.  |.|:.:|.:..||.  |||.|||||||:.::.|    :.:|:.:|.:...|....|
  Fly   191 CVAIYGKYVVVDSTMCAKGFDGSDMSTCTGDSGGPLILYNKTIQQWQQIGINSFVAEDQCTYRLP 255

  Fly   241 AGFQRVTYHLDWIRDHTGIA 260
            :|:.||:..|.:|.|.||||
  Fly   256 SGYARVSSFLGFIADKTGIA 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 40..256 CDD:238113 79/237 (33%)
CG8952NP_573072.1 Tryp_SPc 37..268 CDD:214473 79/235 (34%)

Return to query results.
Submit another query.