DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Cii and Cela3b

DIOPT Version :9

Sequence 1:NP_648217.1 Gene:Jon66Cii / 38953 FlyBaseID:FBgn0035887 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001100162.1 Gene:Cela3b / 298567 RGDID:1307819 Length:269 Species:Rattus norvegicus


Alignment Length:287 Identity:85/287 - (29%)
Similarity:119/287 - (41%) Gaps:72/287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEGKAPYTVGLGF--SGGW--WCGGSII 70
            |.||.|||...|           :.:...|:.||..|.....|:.|.|.:  .|.:  .|||::|
  Rat     9 LLVALASGCGQP-----------SYNPSSRVVNGEDAVPYSWPWQVSLQYEKDGSFHHTCGGTLI 62

  Fly    71 AHDWVLTAEHCIGDADSVTVYFGATWR-----------TNA--QFTHWVGNGNFIKHSSADIALI 122
            |.|||:||.|||..:.:..|..|...|           .||  .|.|...|.|.:...: ||||:
  Rat    63 APDWVMTAGHCISTSRTYQVVLGEFERGVEEGPEQVIPVNAGDLFVHPKWNSNCVSCGN-DIALV 126

  Fly   123 RIPHVDFWHMVNKVELPSYNDRYNDYNEWWAVAC-----------------GWGGTYDGSPLPDY 170
            ::                  .|.....:...:||                 |||......||||.
  Rat   127 KL------------------SRSAQLGDTVQLACLPPAGEILPNGAPCYISGWGRLSTNGPLPDK 173

  Fly   171 LQCVDLQIIHNSECS--GYYG-SVGDNILCVRTPDGKSTCGGDSGGPL--VTHDGT-KLVGVTNF 229
            ||...|.::..:.||  .::| ||...::|. ..|.:|.|.|||||||  ...:|| ::.|||:|
  Rat   174 LQQALLPVVDYAHCSKWDWWGFSVKKTMVCA-GGDIQSGCNGDSGGPLNCPAENGTWQVHGVTSF 237

  Fly   230 GSVAGCQS-GAPAGFQRVTYHLDWIRD 255
            .|..||.: ..|..|.||:...:||.:
  Rat   238 VSSLGCNTLKKPTVFTRVSAFNEWIEE 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiiNP_648217.1 Tryp_SPc 39..253 CDD:214473 76/254 (30%)
Tryp_SPc 40..256 CDD:238113 77/257 (30%)
Cela3bNP_001100162.1 Tryp_SPc 27..262 CDD:214473 76/254 (30%)
Tryp_SPc 28..265 CDD:238113 77/257 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 143 1.000 Inparanoid score I4367
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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