DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon66Ci and CG18754

DIOPT Version :9

Sequence 1:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_652652.3 Gene:CG18754 / 59145 FlyBaseID:FBgn0042106 Length:341 Species:Drosophila melanogaster


Alignment Length:230 Identity:54/230 - (23%)
Similarity:77/230 - (33%) Gaps:75/230 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 WVLTAEHC-IGG-------------------DAVT---------VYFGATWRTNAQFTHWVGSGN 106
            :||||.|| |||                   |.:|         |..|.| ..:..||   .||.
  Fly   134 YVLTAAHCVIGGYLTQNDLVLKSVRLGESTTDCITSESRCPHLDVEVGQT-TVHQGFT---SSGG 194

  Fly   107 FITHGSADIALIRIPH-VDFWHMVNKVELPSYNDRYNDYNEWWAVACGWGGTYDGSPL------- 163
            ...:   ||||:|:.. |.:...:..:.|........|.|   ....||..|.....|       
  Fly   195 TYRN---DIALLRLQFPVRYTKKIQPICLLDAEFPLQDLN---LQISGWDPTKSSQTLITSTVKE 253

  Fly   164 --PDYLQCVDLQIIHNSECASYYGTGTVGDNIICVRVVDGKGTCGGDSGGPLVTHDGSKLVGVTN 226
              |             ::|.:.|.:...... :|........||.|.||.|::...||   ||..
  Fly   254 RNP-------------ADCLNRYPSFRSASQ-VCAGGQRKGDTCAGISGSPVMGIMGS---GVDE 301

  Fly   227 WVSGAG--------C-QAGHPAGFQRVTYHLDWIR 252
            :|..||        | .||.|..:.::.:..:||:
  Fly   302 FVFLAGIASYGQQYCYSAGIPGVYTKIGHFSEWIK 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 52/227 (23%)
Tryp_SPc 37..254 CDD:238113 54/230 (23%)
CG18754NP_652652.3 CLIP 35..84 CDD:288855
Tryp_SPc 108..338 CDD:238113 54/230 (23%)
Tryp_SPc 108..335 CDD:214473 52/227 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435756
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.