DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Ci and Jon99Ci

DIOPT Version :10

Sequence 1:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_524555.1 Gene:Jon99Ci / 43545 FlyBaseID:FBgn0003358 Length:272 Species:Drosophila melanogaster


Alignment Length:269 Identity:141/269 - (52%)
Similarity:178/269 - (66%) Gaps:14/269 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTILALA---VASA-SAYESVVHPKDLS-KVAKIEGRITNGYPAEEGKAPYTVGLGFSGG---WW 61
            ||:|:||   |.|| :...|:|||:||. :...||||||||..|.||:.||.||:..:..   ||
  Fly     4 LTLLSLAFLGVCSALTVPHSLVHPRDLEIRHGGIEGRITNGNLASEGQVPYIVGVSLNSNGNWWW 68

  Fly    62 CGGSIISNEWVLTAEHC-IGGDAVTVYFGATWRTNAQFTHWVGSGNFITHG-----SADIALIRI 120
            ||||||.:.|||||.|| .|.|..::|:||.......|.|.|.|.|||.:.     ..|:|||:.
  Fly    69 CGGSIIGHTWVLTAAHCTAGADEASLYYGAVNYNEPAFRHTVSSENFIRYPHYVGLDHDLALIKT 133

  Fly   121 PHVDFWHMVNKVELPSYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECASYYG 185
            |||||:.:|||:||||.:||||.|...|..|.|||..||||.:.:.|:.|||::|..:||.:|||
  Fly   134 PHVDFYSLVNKIELPSLDDRYNSYENNWVQAAGWGAIYDGSNVVEDLRVVDLKVISVAECQAYYG 198

  Fly   186 TGTVGDNIICVRVVDGKGTCGGDSGGPLVTHDGSKLVGVTNWVSGAGCQAGHPAGFQRVTYHLDW 250
            |.|..:|.|||...|||.||.|||||||||.:|.||:|:|::||..|||.|.||||.|||.:|:|
  Fly   199 TDTASENTICVETPDGKATCQGDSGGPLVTKEGDKLIGITSFVSAYGCQVGGPAGFTRVTKYLEW 263

  Fly   251 IRDHTGIAY 259
            |::.|||.|
  Fly   264 IKEETGIYY 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 118/223 (53%)
Jon99CiNP_524555.1 Tryp_SPc 41..266 CDD:238113 119/224 (53%)

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