DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Jon66Ci and CG5246

DIOPT Version :9

Sequence 1:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_650603.1 Gene:CG5246 / 42072 FlyBaseID:FBgn0038484 Length:272 Species:Drosophila melanogaster


Alignment Length:281 Identity:89/281 - (31%)
Similarity:121/281 - (43%) Gaps:50/281 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKVFLTILALAVASASAYESV-VHPK-----DLSKVAKIEGRITNGYPAEEGKAPYTVG-LGFSG 58
            ||..:.|..|.:.|..:.:|| :|.:     .|..| |.|.|:..|..:..|.|||.|. :...|
  Fly     1 MKCLVLISVLVILSQCSAKSVKIHRRHQLNHHLGHV-KPETRVIGGVDSPTGFAPYQVSIMNTFG 64

  Fly    59 GWWCGGSIISNEWVLTAEHC----------IGGDAVTVYFGATWRTNAQFTHWVGSGNFITHGSA 113
            ...||||||:.:|:|||.||          :.|.......||.:..:       ||....:|...
  Fly    65 EHVCGGSIIAPQWILTAAHCMEWPIQYLKIVTGTVDYTRPGAEYLVD-------GSKIHCSHDKP 122

  Fly   114 ----DIALIR----IPHVDFWH---MVNKVELPSYNDRYNDYNEWWAVACGWGGTYDGSPLPDYL 167
                |||||.    |.:.|...   :.:|..||...|:        ....|||.|.........|
  Fly   123 AYHNDIALIHTAKPIVYDDLTQPIKLASKGSLPKVGDK--------LTLTGWGSTKTWGRYSTQL 179

  Fly   168 QCVDLQIIHNSECAS-YYGTGTVGDNIICVRVVDGKGTCGGDSGGPLVTHDGSK-LVGVTNWVSG 230
            |.:||..|.:..|.| ......:.:..:|....:|:|:|.||||||||  |.:: ||||.||  |
  Fly   180 QKIDLNYIDHDNCQSRVRNANWLSEGHVCTFTQEGEGSCHGDSGGPLV--DANQTLVGVVNW--G 240

  Fly   231 AGCQAGHPAGFQRVTYHLDWI 251
            ..|..|:|..|..|.|:.|||
  Fly   241 EACAIGYPDVFGSVAYYHDWI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 75/238 (32%)
Tryp_SPc 37..254 CDD:238113 76/239 (32%)
CG5246NP_650603.1 Tryp_SPc 41..261 CDD:214473 75/238 (32%)
Tryp_SPc 42..263 CDD:238113 76/239 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436778
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.