DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Ci and snk

DIOPT Version :10

Sequence 1:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:270 Identity:67/270 - (24%)
Similarity:105/270 - (38%) Gaps:83/270 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ITNGYPAEEGKAPYTVGLGFSGG---------WWCGGSIISNEWVLTAEHCIGGDAV---TVYFG 89
            |..|.|...|..|:...||::.|         |.|||:::|..:||||.||....:.   .|..|
  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250

  Fly    90 A----------------------TWRTNAQFTHWVGSGNFITHGSADIALIRIP-HVDFWHMVN- 130
            |                      .:|::|.:           |   ||||:::. .|.|...|. 
  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYY-----------H---DIALLKLTRRVKFSEQVRP 301

  Fly   131 -------KVELPSYNDRYNDYNEWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECASYY---- 184
                   ::::|:            .||.|||.|.......:.|:.|||.::....|...|    
  Fly   302 ACLWQLPELQIPT------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKER 354

  Fly   185 --GTGTVGDNIICVRVVDGKGTCGGDSGGPLVT-----HDGSKLVGVTNWVSGAGCQAGH-PAGF 241
              ..|.:........:..|:.||.||||||:..     :..:.:||:|::  |..|.|.: |..:
  Fly   355 RLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAPGVY 417

  Fly   242 QRVTYHLDWI 251
            .|:..:||||
  Fly   418 TRLYSYLDWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 65/268 (24%)
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 67/270 (25%)
Blue background indicates that the domain is not in the aligned region.

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