DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jon66Ci and Ctrl

DIOPT Version :9

Sequence 1:NP_729372.1 Gene:Jon66Ci / 38952 FlyBaseID:FBgn0035886 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_446461.1 Gene:Ctrl / 117184 RGDID:621501 Length:264 Species:Rattus norvegicus


Alignment Length:247 Identity:80/247 - (32%)
Similarity:116/247 - (46%) Gaps:39/247 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 RITNGYPAEEGKAPYTVGLGFSGGW-WCGGSIISNEWVLTAEHCIGGDAVT-----VYFGATWR- 93
            ||.||..|..|..|:.|.|..:.|: :||||:|:..||:||.||    .||     |..|...| 
  Rat    33 RIVNGENAVPGSWPWQVSLQDNTGFHFCGGSLIAPNWVVTAAHC----KVTPGRHFVILGEYDRS 93

  Fly    94 TNAQFTHWVGSGNFITHGS-------ADIALIRIPH-VDFWHMVNKVELPSYNDRYNDYNEWWAV 150
            :||:....:.....|||.|       .|:.|:::.. ..:...|:.|.|.|.|:....     .:
  Rat    94 SNAEPIQVLSISKAITHPSWNPNTMNNDLTLLKLASPARYTAQVSPVCLASSNEALPA-----GL 153

  Fly   151 AC---GWG---GTYDGSPLPDYLQCVDLQIIHNSECASYYGTGTVGDNIICVRVVDGKGTCGGDS 209
            .|   |||   |.  |:..|..||.|.|.::..::|..|:|: .:.|::||.... |..:|.|||
  Rat   154 TCVTTGWGRISGV--GNVTPARLQQVVLPLVTVNQCRQYWGS-RITDSMICAGGA-GASSCQGDS 214

  Fly   210 GGPLVTHDGSK--LVGVTNWVSGAGCQAGHPAGFQRVTYHLDWIRDHTGIAY 259
            |||||...|:.  |:|:.:| ....|....||.:.||:....||  :..|||
  Rat   215 GGPLVCQKGNTWVLIGIVSW-GTENCNVQAPAMYTRVSKFNTWI--NQVIAY 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jon66CiNP_729372.1 Tryp_SPc 36..251 CDD:214473 75/237 (32%)
Tryp_SPc 37..254 CDD:238113 76/239 (32%)
CtrlNP_446461.1 Tryp_SPc 33..257 CDD:214473 75/237 (32%)
Tryp_SPc 34..260 CDD:238113 76/241 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1522379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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