Sequence 1: | NP_729364.1 | Gene: | Culd / 38946 | FlyBaseID: | FBgn0035880 | Length: | 965 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948896.1 | Gene: | Lrp3 / 89787 | RGDID: | 619729 | Length: | 810 | Species: | Rattus norvegicus |
Alignment Length: | 679 | Identity: | 135/679 - (19%) |
---|---|---|---|
Similarity: | 197/679 - (29%) | Gaps: | 238/679 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 AYVICLLCWPGEAY-PASSSYRD-LDICNHWD----GRRHFLELGSPAGEVHARNVTTTAYRSSP 71
Fly 72 LVFKNDAVAGDVWYQCSLELVTCAECVIRVAFTYANFSKSCGNTGGKSSMCPCEHIQFSEPPYDS 136
Fly 137 TISGQEFCGDGKVFRSKTRTLQLKFFYRASNAHVFSLQYFSERNVRIVSGSPKQSIVGNGSTKSQ 201
Fly 202 -PQV-----ISTPYFPMAYPRDYGIE------HI--LTCEADNCQVRLDFTDFQLGLTSTLEIFD 252
Fly 253 SNGQMLD------SYTGEHFRPPITVSSGK-SLLLQFRGNSATGVGFRAEVSFVSSKQLKDERLV 310
Fly 311 PYTDCGGMVTGPGGAITMMNMIENATDVRLFDCIWIIKPGNNYMMMKTHISLRVDDFYGMAARSE 375
Fly 376 LTIRQGTTSDAVEIENVMWPNNGLSKESHVAPILNGYYIRLRGVFGMSSKLAIVYSVFNYLNCYI 440
Fly 441 GSE-----------FLCGNNHCISIRLHCDGFDHCGDGSDEPDSCEEDWAHLHHDRRWYSHKPNY 494
Fly 495 YFPKIDQYPDLKTAT---------GIFIISTLGIFGVLSGWMVILYRMGVRA-------RHQREL 543
Fly 544 QSHLQTISELLDRQDE------------DRTPDEPPSYEAPPDYEEVIKVGM------------- 583
Fly 584 ----QQELREP-RRQRR---ARRAPPRDR 604 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Culd | NP_729364.1 | CUB | 200..298 | CDD:238001 | 25/118 (21%) |
LDLa | 442..472 | CDD:238060 | 15/40 (38%) | ||
Lrp3 | XP_038948896.1 | CUB | 43..156 | CDD:238001 | 14/44 (32%) |
LDLa | 166..200 | CDD:238060 | 10/59 (17%) | ||
LDLa | 212..249 | CDD:238060 | 10/64 (16%) | ||
CUB | 254..364 | CDD:238001 | 24/117 (21%) | ||
LDLa | 416..452 | CDD:238060 | 6/37 (16%) | ||
LDLa | 455..489 | CDD:238060 | 16/52 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1215 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |