Protein Alignment Culd and ldlra

DIOPT Version :9

• Sequence 1: NP_729364.1
• Gene: Culd / 38946
• FlyBaseID: FBgn0035880
• Length: 965
• Species: Drosophila melanogaster
• Sequence 2: NP_001025454.1
• Gene: ldlra / 387529
• ZFINID: ZDB-GENE-031217-1
• Length: 911
• Species: Danio rerio
• Alignment Length: 33
• Identity: 17/33 - (51%)
• Similarity: 22/33 - (66%)
• Gaps: 1/33 - (3%)

  Fly   443 EFLCGNNHCISIRLHCDGFDHCGDGSDE-PDSC 474
            ::.|||..||:.|..||..|.||||:|| |.:|
Zfish    28 QYQCGNGKCITARWVCDETDDCGDGTDELPAAC 60

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Culd	NP_729364.1	CUB	200..298	CDD:238001
		LDLa	442..472	CDD:238060	15/29 (52%)
ldlra	NP_001025454.1	LDLa	23..55	CDD:197566	13/26 (50%)
		Ldl_recept_a	63..101	CDD:365841
		LDLa	106..140	CDD:238060
		LDLa	144..176	CDD:197566
		Ldl_recept_a	192..227	CDD:365841
		Ldl_recept_a	231..266	CDD:365841
		LDLa	274..304	CDD:238060
		FXa_inhibition	314..348	CDD:373209
		EGF_CA	350..380	CDD:214542
		Ldl_recept_b	437..481	CDD:278487
		Ldl_recept_b	485..525	CDD:278487
		LY	510..551	CDD:214531
		Ldl_recept_b	572..611	CDD:278487
		FXa_inhibition	623..664	CDD:373209
		PHA03247	<666..808	CDD:223021

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1215
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900