Protein Alignment Culd and Ldlrad3

DIOPT Version :10

• Sequence 1: NP_729364.1
• Gene: Culd / 38946
• FlyBaseID: FBgn0035880
• Length: 965
• Species: Drosophila melanogaster
• Sequence 2: NP_001388799.1
• Gene: Ldlrad3 / 366138
• RGDID: 1307846
• Length: 345
• Species: Rattus norvegicus
• Alignment Length: 335
• Identity: 71/335 - (21%)
• Similarity: 108/335 - (32%)
• Gaps: 130/335 - (38%)

  Fly   434 NYLN-CYIGSEFLCGNN------------------------------------------HCISIR 455
            |:.| |.|...|:|.|.                                          |||..|
  Rat    24 NFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGPTFFPCASGIHCIIGR 88

  Fly   456 LHCDGFDHCGDGSDE------PDSCEEDWAHLHH----DRRWYSHKPNYYFPKIDQ---YPDLKT 507
            ..|:||:.|.|||||      |..|.....|..:    |:.:.....|......|:   ...|:.
  Rat    89 FRCNGFEDCPDGSDEENCTANPLLCSTARYHCRNGLCIDKSFICDGQNNCQDNSDEESCESSLEP 153

  Fly   508 ATG-IFIIS----------TLGIFGVLSGWMVILYRMGVRARHQRELQSHLQTI-------SELL 554
            .:| :|:.|          |..|.|....:::::..:.:...|||: :::|.|:       ..||
  Rat   154 GSGQVFVTSENQLVYYPSITYAIIGSSVIFVLVVALLALVLHHQRK-RNNLMTLPVHRLQHPVLL 217

  Fly   555 DR-------------------------QDEDRTPD--EPPSY-EA------------PPDYEEVI 579
            .|                         |.|....:  .|||| ||            ||.|....
  Rat   218 SRLVVLDHPHHCNVTYNVNNGVQYVATQAEQNASEVGSPPSYSEALLDQRPAWYDLPPPPYSSDT 282

  Fly   580 KVGMQQELREPRRQRRARRAPP-RDRSCSR-AASNCTVQSVLPLHRSCTLERDQEQPSTSAAAMT 642
            :...|.:|            || |.||.|. :||:....|:|.:..| :...:|..|:.|.:...
  Rat   283 ESLNQADL------------PPYRSRSGSAYSASSQAASSLLSVEGS-SHSPEQPGPAESTSEPR 334

  Fly   643 HAVAATDTTE 652
            .:|.:..|.|
  Rat   335 DSVPSQGTEE 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Culd	NP_729364.1	CUB	200..298	CDD:238001
		LDLa	442..472	CDD:238060	16/77 (21%)
Ldlrad3	NP_001388799.1	LDLa	32..64	CDD:238060	3/31 (10%)
		LDLa	71..106	CDD:238060	13/34 (38%)
		LDLa	113..147	CDD:238060	5/33 (15%)