DRSC/TRiP Functional Genomics Resources

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Protein Alignment Culd and CG6553

DIOPT Version :9

Sequence 1:NP_729364.1 Gene:Culd / 38946 FlyBaseID:FBgn0035880 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster


Alignment Length:173 Identity:45/173 - (26%)
Similarity:63/173 - (36%) Gaps:54/173 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 VFGMSSKLAIVYSVFNYL--NCYIGSE------FLCGNNHCISIRLHCDGFDHCGDGSDEPDS-C 474
            :||....|:|...:|..|  ...:||:      ..||...||.:...|||..:|.|||||..: |
  Fly     1 MFGAHQNLSIQLVIFLSLAVTICLGSQNATSCGHRCGGGDCIQLDQLCDGSANCLDGSDETVAMC 65

  Fly   475 EEDWAHLHHDRRWYSHKPNYYFPKIDQYPDLKTATGIFIISTLGIFGVL--------SGWMVILY 531
            |:.|.            |.|.|         :.:.|..|.||....||.        .||:    
  Fly    66 EKVWC------------PGYAF---------RCSYGACIASTAVCDGVQDCVDGSDEQGWL---- 105

  Fly   532 RMGVRARHQR------EL---QSHLQTISELLDRQDEDRTPDE 565
               .||:.|:      |:   .....|.|:|.|...:.|..|:
  Fly   106 ---CRAQMQQANCDNWEMYCSSGQCMTYSKLCDGIRDCRDGDD 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CuldNP_729364.1 CUB 200..298 CDD:238001
LDLa 442..472 CDD:238060 14/35 (40%)
CG6553NP_610911.1 LDLa 34..60 CDD:197566 11/25 (44%)
LDLa 70..101 CDD:197566 9/51 (18%)
LDLa 115..146 CDD:197566 7/31 (23%)
Frag1 <260..>303 CDD:287278
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1215
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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