DRSC/TRiP Functional Genomics Resources

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Protein Alignment Culd and egg-1

DIOPT Version :10

Sequence 1:NP_729364.1 Gene:Culd / 38946 FlyBaseID:FBgn0035880 Length:965 Species:Drosophila melanogaster
Sequence 2:NP_498237.2 Gene:egg-1 / 175804 WormBaseID:WBGene00015083 Length:551 Species:Caenorhabditis elegans


Alignment Length:433 Identity:80/433 - (18%)
Similarity:126/433 - (29%) Gaps:176/433 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 NYLNCYIGS------------EFLC-GNNHCISIRLHCDGFDHCGDGSDEPD--SCEEDWAHLHH 483
            |..||..||            :|.| |:|.|:.:...|||.:.|.|.|||.:  .|:.:      
 Worm   199 NVENCPDGSDEAVCKSSCSKDQFKCPGSNACLPLSAKCDGINDCADASDEKNCSKCQNN------ 257

  Fly   484 DRRWYSHKPNYYFPKIDQYPDLKTATGIFIISTLGIFGVLSGWMVILYRMGVRARHQRELQSHLQ 548
                 :||..                                      :..::|.|.      ..
 Worm   258 -----AHKCG--------------------------------------KQCIKASHV------CD 273

  Fly   549 TISELLDRQDEDRTPDEPPSYEAPPDYEEVIKVGMQQELREPRRQRRARRAPPRDRSCS------ 607
            .:::..|..||.:...:..|             |..:.|.:........:.....:.|:      
 Worm   274 GVAQCADGSDEQQCDCQRCS-------------GTDKALCDDGTCIMRTQVCDGKKDCTDGMDEE 325

  Fly   608 RAASNCTVQSVLPLHRSCTLERDQEQPSTSAAAMTHAVAATDTTEDAEH---------------- 656
            ....:||::|..|..:..|.. |.:|       .|.|.|.:.:.|..:|                
 Worm   326 DCPGSCTIESFSPKLKMVTCS-DGKQ-------YTEAEACSGSFESCDHDCPNSKCHPKLAFTCP 382

  Fly   657 VQTMAQRMLLA--------------------TAI--CGTA-GTSLPA---AKESGQRVQSV---- 691
            ....|::|.::                    |.|  ||.| .|....   ..:|.:|...|    
 Worm   383 ASKEARKMCISRRKVCDGTPDCDDGADEINCTPIKECGIAKNTQFKCDHKCLDSSRRCDGVWDCE 447

  Fly   692 ------GISTSPSSLSAGGELPTAGGSATTPGST----ADECTQGGDSLSISL--TLGLPSTTAE 744
                  |....||     |.:..|......|..|    ..:|:.|.|.|..|.  .||:.|.|. 
 Worm   448 DKSDEKGCDKCPS-----GTIKCAADKKCLPAFTRCNGVADCSDGSDELKCSCQECLGVHSNTY- 506

  Fly   745 SPVTTDQNQLQKQ----SPEQTISNCTEHT--------FLKRS 775
              :..:.|:..|:    ||.....|.| :|        |||:|
 Worm   507 --MCNESNRCLKRDEVCSPYSMCPNAT-YTDKAFCAALFLKKS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CuldNP_729364.1 CUB 200..298 CDD:238001
LDLa 442..472 CDD:238060 14/42 (33%)
egg-1NP_498237.2 LDLa 123..159 CDD:238060
LDLa 216..251 CDD:238060 13/34 (38%)
LDLa 254..287 CDD:238060 8/87 (9%)
LDLa 300..327 CDD:238060 1/26 (4%)
LDLa <391..413 CDD:238060 0/21 (0%)
LDLa 425..455 CDD:238060 4/29 (14%)
LDLa 458..493 CDD:238060 10/39 (26%)
Blue background indicates that the domain is not in the aligned region.

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