DRSC/TRiP Functional Genomics Resources

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Protein Alignment Culd and Lrp8

DIOPT Version :10

Sequence 1:NP_729364.1 Gene:Culd / 38946 FlyBaseID:FBgn0035880 Length:965 Species:Drosophila melanogaster
Sequence 2:XP_011238756.1 Gene:Lrp8 / 16975 MGIID:1340044 Length:1010 Species:Mus musculus


Alignment Length:29 Identity:17/29 - (58%)
Similarity:19/29 - (65%) Gaps:0/29 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 SEFLCGNNHCISIRLHCDGFDHCGDGSDE 470
            |:|.|.|.|||..|..|||.:.|.|||||
Mouse    83 SDFTCDNGHCIPERWKCDGEEECPDGSDE 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CuldNP_729364.1 CUB 200..298 CDD:238001
LDLa 442..472 CDD:238060 17/29 (59%)
Lrp8XP_011238756.1 LDLa 41..75 CDD:238060
LDLa 79..111 CDD:197566 15/27 (56%)
LDLa 121..157 CDD:238060
LDLa 200..232 CDD:197566
LDLa 256..286 CDD:238060
LDLa 292..326 CDD:238060
Ldl_recept_a 330..366 CDD:395011
FXa_inhibition 387..421 CDD:464251
EGF_CA 423..453 CDD:214542
LY 492..527 CDD:214531
LY 537..578 CDD:214531
Ldl_recept_b 599..639 CDD:459654
LY 623..665 CDD:214531
Ldl_recept_b 686..726 CDD:459654
FXa_inhibition 744..781 CDD:464251
Blue background indicates that the domain is not in the aligned region.

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