DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and RABGAP1L

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001353375.1 Gene:RABGAP1L / 9910 HGNCID:24663 Length:1051 Species:Homo sapiens


Alignment Length:1083 Identity:399/1083 - (36%)
Similarity:565/1083 - (52%) Gaps:180/1083 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 HQQKSLTLPLTGSGGGSVDPEMRFPCTLFTPKSEETLDDASSSNRVGHSVFYDCIDASPACVEEK 180
            |::|. .|.:..:|...::..|.........:....|.|..||:.:....|.| |.||.......
Human    39 HEEKP-QLKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGD-IPASQTNKPSL 101

  Fly   181 QDAMKPEKGDTTDEEVSE----IDQGCTIFSGVTYLGAANINAPKSETEVYRIMGELNSGSKSVG 241
            |..:.|...:.:....|.    .::...:|:.:||||...:::|::|.|..|.|..:.|.|: ..
Human   102 QLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQ-YP 165

  Fly   242 LKITVSIPNCSEGLVVLHDAESNTIIATYEISSIILYYRGPVDTVENGCFAFT-WLHGDALFQCH 305
            ..:|:.:||..||.|.:.|..||..||::.|..::...||...|.|:.||||| ..||...||.|
Human   166 FPVTLYVPNVPEGSVRIIDQSSNVEIASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIH 230

  Fly   306 VFRCHIPEAVNQVSACFQKAFQTYPPSMSCSLNSAVDMANSV----TSDVSGNPLNTAGYEFIVS 366
            ||.|.|.|||:::...|..||:.       |.....|:.:||    .|||         :.|.||
Human   231 VFSCEIKEAVSRILYSFCTAFKR-------SSRQVSDVKDSVIPTPDSDV---------FTFSVS 279

  Fly   367 LEIRERVAKNSYAAVPRDRG--CFKLRANTDKEVCITVKQTPSNVLQPLHIERCFGVLVAPGKLV 429
            ||::|...|.:::.||:||.  .|||:...:|:|.|||:|. ||  :.|.||||||:|::||:.|
Human   280 LEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQL-SN--KELAIERCFGMLLSPGRNV 341

  Fly   430 VQKDMHLIDMHSMGYIQPGGTGVATESDSNAQQSSSWPYTIRAEWKAQEKAFEQLNLESSKTN-- 492
            ...||||:||.|||....|..                 |.|...|......|..||.|:.|..  
Human   342 KNSDMHLLDMESMGKSYDGRA-----------------YVITGMWNPNAPVFLALNEETPKDKQV 389

  Fly   493 -LTVAVDIVMRRIQEPVRFVIETPVTIQSASEMRIMDHFMSKRPMTLRFYLHLKRTE-------- 548
             :|||||:|:..:.|||||::||.|.:..|:| |..  :.|::..|..|::.||::|        
Human   390 YMTVAVDMVVTEVVEPVRFLLETVVRVYPANE-RFW--YFSRKTFTETFFMRLKQSEGKGHTNAG 451

  Fly   549 ESNWKVNSI----DPSEEITEQPGHQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYSSDGDE 609
            ::.::|.|:    |..|.:|...|                     ....|.:||   :...:.|.
Human   452 DAIYEVVSLQRESDKEEPVTPTSG---------------------GGPMSPQDD---EAEEESDN 492

  Fly   610 PLLSGTGEVSKDCSQDTLDEWDPILREWDSE--KRPKNLAPLVRLGVPEALREKIWQKLANVEGR 672
            .|.||||:|||||.:..|..|..:|.:|.|.  .|||.|:.||:.|||||||.::||.||.....
Human   493 ELSSGTGDVSKDCPEKILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDN 557

  Fly   673 MEMNDKYKILITKETKCETVIQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQG 737
            ..|.|:|:|||||::..|:||.||||||||||..||:.||.||::|:|:.|||:|:|.::|||||
Human   558 QAMLDRYRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQG 622

  Fly   738 LSFIAASLLLHMPEEDAFCVLVALMYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTA 802
            .||:||.||||||||.||||||.:||||||||||:..||.|:.:.||||||:::|||.||.||:.
Human   623 QSFLAAVLLLHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSD 687

  Fly   803 CGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGIL 867
            ..:|.|||||||||||:||:||||.|||::|:.|.:||.::|.||:.||...:.||.|.||||.|
Human   688 LNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGAL 752

  Fly   868 KYFRVTLPKKCRSSSQARKVMKQACERKI--KKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEE 930
            |:|||.|||:.|:...||::|:|||..|:  ||||:||:|:  :...:.:|::|..:  :|:..|
Human   753 KFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEKEY--QTMRESQLQQEDPM--DRYKRE 813

  Fly   931 RRKMQA--------------------------------EIDALNKQLTSAKERAVEKE------- 956
            .|::|.                                :.|.|||:|...|:|.||.|       
Human   814 NRRLQEASMRLEQENDDLAHELVTSKIALRNDLDQAEDKADVLNKELLLTKQRLVETEEEKRKQE 878

  Fly   957 ---------------------KKHTGIIQEYKQIIQ----RQEQDMNTLSETLGKVMHMVSNCQD 996
                                 ||.|.||.|||||..    |.|:......|.|..|...:..|:.
Human   879 EETAQLKEVFRKQLEKAEYEIKKTTAIIAEYKQICSQLSTRLEKQQAASKEELEVVKGKMMACKH 943

  Fly   997 CQQQIDAGNDNAKSDDGKNRGQTD-AMRNANEHPLGPLDPLNAASQRIRELELELAQAKLAQVEA 1060
            |            ||.....|... |.....:..:...|..::..:::||:||||||.||..|||
Human   944 C------------SDIFSKEGALKLAATGREDQGIETDDEKDSLKKQLREMELELAQTKLQLVEA 996

  Fly  1061 ECKNQDLNHQLSNTLSELQTNRNSWQPWLSKTFNSLQEKVTTR 1103
            :||.|:|.||....::|:|..:||   |.|||.||::....|:
Human   997 KCKIQELEHQRGALMNEIQAAKNS---WFSKTLNSIKTATGTQ 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 48/128 (38%)
DUF3694 377..523 CDD:463599 59/150 (39%)
TBC 650..858 CDD:214540 125/207 (60%)
SMC_prok_B <876..>1087 CDD:274008 77/277 (28%)
TPH <883..>977 CDD:464007 42/159 (26%)
RABGAP1LNP_001353375.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 3/13 (23%)
PTB_Rab6GAP 129..257 CDD:269922 49/135 (36%)
DUF3694 290..421 CDD:463599 59/150 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..503 14/65 (22%)
TBC 535..744 CDD:214540 126/208 (61%)
Smc <794..>1020 CDD:440809 59/239 (25%)

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