Protein Alignment GAPcenA and Usp6nl

DIOPT Version :9

• Sequence 1: NP_001097549.1
• Gene: GAPcenA / 38945
• FlyBaseID: FBgn0035879
• Length: 1194
• Species: Drosophila melanogaster
• Sequence 2: NP_852064.2
• Gene: Usp6nl / 98910
• MGIID: 2138893
• Length: 842
• Species: Mus musculus
• Alignment Length: 609
• Identity: 135/609 - (22%)
• Similarity: 233/609 - (38%)
• Gaps: 132/609 - (21%)

  Fly   610 PLLSGTGEVSKDCSQDTLDEWDPILREWDSEKRPKNLAPLVRLGVPEALREKIWQKLANV-EGRM 673
            |..:...:..|....:...:|..:|::|:..|..:.....:..|:|..||.::|..|..: :.:.
Mouse    80 PYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIYKGIPLQLRGEVWALLLEIPKMKE 144

  Fly   674 EMNDKYKILITKETKCETVIQR---DIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYC 735
            |..|.|..|..:...|...|::   |::|||..|..|::..|..|.:||.|..||:::::|||||
Mouse   145 ETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMFRDRYGVKQQSLFHVLAAYSIYNTEVGYC 209

  Fly   736 QGLSFIAASLLLHMPEEDAFCVLVALMY--DYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHE 798
            ||:|.|.|.||::|.|||||..||.|..  .:.:...:..||..|.......|:::...|.||.:
Mouse   210 QGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQ 274

  Fly   799 HFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDF 863
            |..:..|.|..|..:||...:..|.|......:.|:::.:|..||..::.|:|.:.:..|.:|..
Mouse   275 HLDSQEIYTSFYTMKWFFQCFLDRTPFRLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSM 339

  Fly   864 EGILKYFRVTLPKKCRSSSQARKVMKQACERKIKKLKQYEEEFLLKKQHKERLE-KEAQIYENRF 927
            |.::::.:.||.|..                      .:|::|::::......| |.|::.....
Mouse   340 EELVEFLQETLAKDF----------------------FFEDDFVIEQLQVSMAELKRAKLDLPEP 382

  Fly   928 GEERRKMQAEIDALNKQLT-----SAKERAVEKEKKHTGIIQEYKQIIQRQEQDMNTLSETLGKV 987
            |:|....:..:..|..:..     |..:|:|.:....|.         .|:|......:.....|
Mouse   383 GKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS---------SRREDGSPRKNHEHSPV 438

  Fly   988 MHMVSNC-----QDCQQQIDAGNDNAKSDDGKNRGQTDAMRNANEHPLGPLDPLNAASQRIRELE 1047
            .|..:..     |..::.:|.|:.|.|.:....|..:..|::::.|
Mouse   439 HHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDSSRH------------------- 484

  Fly  1048 LELAQAKLAQVEAECKNQDLNHQLSNTLSELQTN-RNSWQP-WLSKTFNSLQEKVTTRGGHRDNG 1110
                               .||..:|..|...:| |..:.| |...:..|..|:.|.......:.
Mouse   485 -------------------YNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSH 530

  Fly  1111 SGGP-MPSFQSYMGQAPTTL------------------SEASS----PSGNQEYKTFAFASVG-- 1150
            |..| :|  .:..|.|.|.|                  |.||.    |.|..|:.  |.|..|
Mouse   531 SALPALP--VAIPGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHG--ASAEEGPE 591

  Fly  1151 ---------------GSPKLPSKF 1159
                           ..||:|:||
Mouse   592 RTHPHSPRKHPEPSPSPPKVPNKF 615

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GAPcenA	NP_001097549.1	PTB_Rab6GAP	204..332	CDD:269922
		DUF3694	429..523	CDD:289256
		TBC	650..858	CDD:214540	67/213 (31%)
		Phage_Gp23	<914..991	CDD:287621	14/82 (17%)
Usp6nl	NP_852064.2	TBC	120..335	CDD:214540	67/214 (31%)
		SPRR2	<590..642	CDD:291486	5/26 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5210
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810