DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and TBC1D4

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_055647.2 Gene:TBC1D4 / 9882 HGNCID:19165 Length:1298 Species:Homo sapiens


Alignment Length:1230 Identity:278/1230 - (22%)
Similarity:469/1230 - (38%) Gaps:336/1230 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDNLSTKSSESSITTSGEYEI-----VTDSNVASP-------MEQV----KQVVNQEGTQPEVGG 50
            :|...:|.:|.:...|.::|:     ||.::..:|       ||:.    :|.:..:|.|.  |.
Human   184 EDAKPSKDNEDAFYNSQKFEVLYCGKVTVTHKKAPSSLIDDCMEKFSLHEQQRLKIQGEQR--GP 246

  Fly    51 KPPTSLSALALSSPEAGGD-------------------RSPTLDMAH----NRNLSDM----QHE 88
            .|...|:.|.:..|.:.||                   ..|.|..:.    .|.|.|.    |.|
Human   247 DPGEDLADLEVVVPGSPGDCLPEEADGTDTHLGLPAGASQPALTSSRVCFPERILEDSGFDEQQE 311

  Fly    89 MTDALKDLE-LERGVAASGEKSAQR-----LPSHQQKSLTLPLTGSGGGSVDPEM---------R 138
            .......:. ::|.|....:||..|     .|||.|.|             |.|.         |
Human   312 FRSRCSSVTGVQRRVHEGSQKSQPRRRHASAPSHVQPS-------------DSEKNRTMLFQVGR 363

  Fly   139 FPCTLFTPKSEETL------DDASSSNRVGHSVFYDCIDASPACVEEKQDAMKPEKG-------- 189
            |...|.:|.::..:      |.:|.|..:.|...:..|     |.|      .||.|        
Human   364 FEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFI-----CRE------SPEPGLSQYICYV 417

  Fly   190 ------DTTDEEVSEIDQGCTIFSGVTYLGAA-----------------------NINAPKSETE 225
                  ...||.:..:.|.   ||....|.:|                       .:..|:::..
Human   418 FQCASESLVDEVMLTLKQA---FSTAAALQSAKTQIKLCEACPMHSLHKLCERIEGLYPPRAKLV 479

  Fly   226 VYRIMGELNSGSKS-----VGLKITVSIPNCSEGLVVLH-----DAESNTIIATYEISSIILYYR 280
            :.|.:..|....::     |.....||....:| ||:||     :|:..|.:...|..|.|....
Human   480 IQRHLSSLTDNEQADIFERVQKMKPVSDQEENE-LVILHLRQLCEAKQKTHVHIGEGPSTISNST 543

  Fly   281 GPVDTVENGCFAFTWLHGDALFQCHVFRCHIPEAVNQVSACFQKAFQTYPPSMSCSLNS--AVDM 343
            .|.:...:|.|....|..              :|...:::..:..|......|...|.|  :.:.
Human   544 IPENATSSGRFKLDILKN--------------KAKRSLTSSLENIFSRGANRMRGRLGSVDSFER 594

  Fly   344 ANSVTSDVSGNPLNTAGYEFIVSLEIRERVAKNSYAAVPR---DRGCFKLRANTDKEVCITVKQT 405
            :||:.|:...:|.::.......|      ...:::...|.   |...|:.||:       |....
Human   595 SNSLASEKDYSPGDSPPGTPPAS------PPSSAWQTFPEEDSDSPQFRRRAH-------TFSHP 646

  Fly   406 PSNVLQPLHIERCFGVLVAPGKLVVQKDMHLIDMHSMGYIQPGGTGVATESDSN----------A 460
            ||:..:.|:::                     |..:.|...|.....::|..||          :
Human   647 PSSTKRKLNLQ---------------------DGRAQGVRSPLLRQSSSEQCSNLSSVRRMYKES 690

  Fly   461 QQSSSWP----------YTIRAEWKA-----------------QEKAFEQLNLESSK------TN 492
            ..|||.|          :|..:..|:                 |:.|.|..:.|..|      :|
Human   691 NSSSSLPSLHTSFSAPSFTAPSFLKSFYQNSGRLSPQYENEIRQDTASESSDGEGRKRTSSTCSN 755

  Fly   493 LTVAV---DIVMRRI--QEPVRFVIETPVTIQSASEMRIMDHF--------------MSKRPMTL 538
            .:::|   .:..|||  ::.:...:.:|:. :|.|.|:..|..              |.:.|:.:
Human   756 ESLSVGGTSVTPRRISWRQRIFLRVASPMN-KSPSAMQQQDGLDRNELLPLSPLSPTMEEEPLVV 819

  Fly   539 RFYLHLKRTEESNWKVNSIDPSEEITEQPGHQQSSSLLKMGMNNLSRIVR----SSSIASIEDDC 599
                          .::..|..|:|.|:...::..||.:..::....::|    :..:.:..|:.
Human   820 --------------FLSGEDDPEKIEERKKSKELRSLWRKAIHQQILLLRMEKENQKLEASRDEL 870

  Fly   600 PS-----DYSSDGDEPLLSGTGEVSKDCSQDTLDEWDPILREWDSEKR--PKNLAPLVRLGVPEA 657
            .|     ||...|             .|.::.|..||..|....::.|  .:::..|::.|||::
Human   871 QSRKVKLDYEEVG-------------ACQKEVLITWDKKLLNCRAKIRCDMEDIHTLLKEGVPKS 922

  Fly   658 LREKIWQKLA-------NVEGRMEMND-KYKILITKETKCETVIQRDIHRTFPAHKCFKEIGGSG 714
            .|.:|||.||       .:..:.:..| .||.|:.:.|..:..|..|:.||||.|..|....|.|
Human   923 RRGEIWQFLALQYRLRHRLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPG 987

  Fly   715 QDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVALMYDYGLRDLYKAGFEVLY 779
            |.:||.:.|||::.|.|||||||:||:|..|||||.||.||.:|..||||.|.|..|:.....|.
Human   988 QLSLFNLLKAYSLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQ 1052

  Fly   780 LRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLF 844
            :::|||.||:.|....|:.|.....|...:||:.|||||:.::|.|.||..|.|:..|.|..|:|
Human  1053 IQMYQLSRLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQGTEVIF 1117

  Fly   845 QVAVTLLSICESDLRQLD-FEGILKYFRVTLPKKCRSSSQARKVMKQACERKI-KKLKQYEEEFL 907
            :||::|||..|:.:.:.: ||.|:::.:.|||.  .::|:..|::.|..|..| |:|..||.|:.
Human  1118 KVALSLLSSQETLIMECESFENIVEFLKNTLPD--MNTSEMEKIITQVFEMDISKQLHAYEVEYH 1180

  Fly   908 LKKQHKERLEKEAQIYENRFGEERRKMQAEIDALNKQLTSAKERAVEK-EKKHTGI--------- 962
            :       |:.|.|  |:.:..|..:...:::..|.||.......:|| :..||.|         
Human  1181 V-------LQDELQ--ESSYSCEDSETLEKLERANSQLKRQNMDLLEKLQVAHTKIQALESNLEN 1236

  Fly   963 ----IQEYKQIIQRQEQDMNTLSETLGKVMHMVS-----NCQDCQQQIDAGNDNAKSDDG 1013
                ..:.|.:|:..||:.....:|:.::..::.     ||....:.::. |.|.|:..|
Human  1237 LLTRETKMKSLIRTLEQEKMAYQKTVEQLRKLLPADALVNCDLLLRDLNC-NPNNKAKIG 1295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 26/160 (16%)
DUF3694 377..523 CDD:463599 33/196 (17%)
TBC 650..858 CDD:214540 91/215 (42%)
SMC_prok_B <876..>1087 CDD:274008 34/158 (22%)
TPH <883..>977 CDD:464007 26/108 (24%)
TBC1D4NP_055647.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
PTB 31..190 CDD:214675 1/5 (20%)
PTB_TBC1D1_like 193..437 CDD:269967 54/272 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 241..287 9/47 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..353 11/48 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..685 22/132 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..765 7/39 (18%)
DUF3350 801..864 CDD:463365 9/76 (12%)
TBC 918..1132 CDD:214540 91/213 (43%)
COG4372 1161..>1267 CDD:443500 26/114 (23%)
Blue background indicates that the domain is not in the aligned region.

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