DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and GYL1

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_013917.1 Gene:GYL1 / 855230 SGDID:S000004804 Length:720 Species:Saccharomyces cerevisiae


Alignment Length:936 Identity:174/936 - (18%)
Similarity:321/936 - (34%) Gaps:333/936 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 INAPKSETEVYR----IMGELNSGS-----------KSVGLKITVSIPNCSEGLV---VLHDAES 263
            |:.|:.:.:.|.    .|...|:.|           :|:|     :..|..|.|:   :..:::|
Yeast    36 ISVPEGDEKAYSDEKVEMATTNASSNFGSNESAKDGESIG-----AFSNPHEALMQSKLREESQS 95

  Fly   264 NTIIATYEISSIILYYRGPVDTVENGCFAFTWLHGDALFQCHVFRCHIPEAVNQVSACFQKAFQT 328
            .||:.:.::|.       .::|.|:                     .:.||:.::::      ..
Yeast    96 KTILPSDDLSQ-------QLETEES---------------------KVEEALKRITS------PP 126

  Fly   329 YPPSMSCSLNSAVDMANSVTSDVSGNPLNTAGYEFIVSLEIRERVAKNSYAAVPRDRGCFKLRAN 393
            .||...|...||..:.:|:...::||                    ||..|  |.||        
Yeast   127 LPPRADCIEESASALKSSLPPVLAGN--------------------KNDQA--PLDR-------- 161

  Fly   394 TDKEVCITVKQTPSNVLQPLHIERCFGVLVAPGKLVVQKDMHLIDMHSMGYIQPGGTGVATESDS 458
                     .|.|                  |.::|..:.:||        ..|.|....::|.:
Yeast   162 ---------PQLP------------------PRQVVNAETLHL--------KAPHGNATPSKSPT 191

  Fly   459 NA--QQSSSWPYTIRAEWKAQEKAFEQLNLESSKTNLTVAVDIVMRRIQEPVRFVIETPVTIQSA 521
            :|  ..|||.|.|:..                             |||::|:             
Yeast   192 SAVGNSSSSTPPTLPP-----------------------------RRIEDPL------------- 214

  Fly   522 SEMRIMDHFMS---KRPMTLRFY---------------LHLKRTEESNWKVNSIDPSEEITEQPG 568
             ::....||::   ||.|.  ||               |:||   |.:.|:|:.:..||:     
Yeast   215 -DLAAQKHFLASTFKRNML--FYKSEDNSIKCDLDKNILNLK---EDSKKINNNEIPEEV----- 268

  Fly   569 HQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYSSDGDEPLLSGTGEVSKDCSQDTLDEWDPI 633
               ||..||:                                                :.::..|
Yeast   269 ---SSFWLKV------------------------------------------------IGDYQNI 282

  Fly   634 LREWDSEKRPKNLAPLVRLGVPEALREKIWQKLANVEGRMEMNDKYKILITKETKCETVIQRDIH 698
            |.. |.|.....|:    .|:|.|.|..:||.::..:.: ..:..|:..:|:      :...|:.
Yeast   283 LIN-DIETLHFQLS----RGIPAAYRLVVWQLVSYAKSK-SFDPIYETYLTE------MAPFDVQ 335

  Fly   699 RTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEED--AFCVLVAL 761
            ......|...|:.......:..|.|||.:.|.|..:...:::| .:::|.:.||:  ||.:||.|
Yeast   336 EFENQLKMMDEVPSEYVKRISNVLKAYLLFDPECEFSTDIAYI-INMILDVCEEEANAFGLLVRL 399

  Fly   762 MYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLC 826
            |..||||.|:......:.:..|:.:||:::..|::|.|....|:.:.|:...:|.||:..:.|..
Yeast   400 MKVYGLRLLFLPSASEIDILCYKFDRLVEEFYPEIHNHMVEKGVRSSMFLPGFFTTLFQKKLPTE 464

  Fly   827 FVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKYFR-----------------VTL 874
            ....:.|:..|:|:..:.::..||||.....|.::.|:.:|:..:                 ..|
Yeast   465 IQPRIGDMVFLEGIDSIMRILATLLSNSRDHLLKMGFDDMLELLKSGLLDAYIKQNDGTRGDTLL 529

  Fly   875 PKKCRSSSQARKVMKQACERKIKKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERRKMQAEID 939
            ..:|........:||.|...  |.:|:|..|:    :...||:.|.::......|:...:|..:.
Yeast   530 SNECMDKLLQDSMMKVAITP--KTMKKYSSEY----EEIHRLDNEKEVQYKSITEKNLHLQKHVR 588

  Fly   940 ALNKQLTSAKERAVEKEKKHTGIIQEYKQIIQRQEQDMNTLSETLGKVMHMVSNCQDCQQQIDA- 1003
            .|....||.       .::|..|..|   :::.:....:.|:|..|..:.::    |.::::|: 
Yeast   589 KLENDYTSL-------NREHVTIANE---LVKNRLNIESVLNENNGYKLQIL----DLKKKLDSE 639

  Fly  1004 ----------GNDNAKSDDGKNRGQTDAMRNANEHPLGPLDPLNAASQRIRELELELAQAKLAQV 1058
                      .||..|..:...:..|..|           |.......||.|||..:.:.|.|. 
Yeast   640 KKKQVLGVYVPNDLKKDLEETMKKNTQVM-----------DENLKLQDRISELERLIEEIKTAN- 692

  Fly  1059 EAECKNQDLNHQLSNTLSELQTNRNS 1084
                ||        .||.|...::|:
Yeast   693 ----KN--------GTLFEYSNSKNN 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 20/132 (15%)
DUF3694 377..523 CDD:463599 23/147 (16%)
TBC 650..858 CDD:214540 51/209 (24%)
SMC_prok_B <876..>1087 CDD:274008 43/220 (20%)
TPH <883..>977 CDD:464007 18/93 (19%)
GYL1NP_013917.1 COG5210 27..569 CDD:227535 141/759 (19%)

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