DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and GRTP1

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001273661.1 Gene:GRTP1 / 79774 HGNCID:20310 Length:344 Species:Homo sapiens


Alignment Length:281 Identity:81/281 - (28%)
Similarity:132/281 - (46%) Gaps:33/281 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 EWDPILREWDSEKRPKNLAPLVRLGVPEALREKIWQKLANVEGRMEMNDKYKILI---TKETKCE 690
            :|..:| :.....|.:.:...||.|||...|.::|..|:..:.:|:.|..|...:   .:..:.|
Human    45 KWSRLL-QGGGVPRSRTVKRYVRKGVPLEHRARVWMVLSGAQAQMDQNPGYYHQLLQGERNPRLE 108

  Fly   691 TVIQRDIHRTFPAHKCF-KEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASL-LLHMPEED 753
            ..|:.|::||||.:..| |......|..|:.|..||..|:..||||||::|||..| |:...||:
Human   109 DAIRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEE 173

  Fly   754 AFCVLVALMYDYG--LRDLYKAGFEVLYLRLYQ--LERLIKDQLPKLHEHFTACGIETHMYASQW 814
            :|.:|.||:   |  |.|.|...  :|.|:..|  |..|::.:||.:.......|:...:..|:|
Human   174 SFWLLDALV---GRILPDYYSPA--MLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRW 233

  Fly   815 FLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCR 879
            |:.|:....|:..|..:.|....:|..::|:||:||:    ...::|..|.      .::|..|.
Human   234 FICLFVDILPVETVLRIWDCLFNEGSKIIFRVALTLI----KQHQELILEA------TSVPDICD 288

  Fly   880 SSSQARK---VMK-----QAC 892
            ...|..|   ||:     |.|
Human   289 KFKQITKGSFVMECHTFMQVC 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 68/216 (31%)
SMC_prok_B <876..>1087 CDD:274008 7/25 (28%)
TPH <883..>977 CDD:464007 6/18 (33%)
GRTP1NP_001273661.1 TBC 65..278 CDD:214540 69/221 (31%)
Blue background indicates that the domain is not in the aligned region.

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