DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and Tbc1d30

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:XP_030101194.1 Gene:Tbc1d30 / 74694 MGIID:1921944 Length:909 Species:Mus musculus


Alignment Length:833 Identity:168/833 - (20%)
Similarity:296/833 - (35%) Gaps:239/833 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   519 QSASEMRIMDHFMSKRPMTLRFYL-HLKRTEESNWKVNSIDPSEEITEQPGHQQSSSL--LKMGM 580
            :.|.:.|::.. :.:|| :||..: :|:|.:.|..|.    ...|:..:.|.|.:..|  ||...
Mouse    93 RGAGDSRVLQE-LRERP-SLRLQMQYLQRKDSSELKT----VLRELKYRIGIQSAKLLRQLKQKD 151

  Fly   581 NNLSRIVRSSSIASIEDDCPSDYSSDGD-EPLLSGTGEVSKDCSQDTLDEWDPILREWDSEKRPK 644
            ..|.::.::..|.:.   |....|.... :..|..|.|.|  ..|:...:|      :|:.|...
Mouse   152 RLLHKVQKNCDIVTA---CLQAVSQKRRVDTKLKFTLEPS--LGQNGFQQW------YDALKAVA 205

  Fly   645 NLAPLVRLGVPEALREKIWQKLA-----------NVEGRMEMNDKYKILITKETKCETVIQRDIH 698
            .|:    .|:|:..|.|:|..||           :...|...|::..   ..:......|.:|:|
Mouse   206 RLS----TGIPKEWRRKVWLTLADHYLHSIAIDWDKTMRFTFNERSN---PDDDSMGIQIVKDLH 263

  Fly   699 RTFPAHKCFKEIGGSGQD--ALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMP--EEDAFCVLV 759
            ||..:..|.:|   :.||  .|.:|..|||..:..||||||.:.:||.:|..|.  |.||..:::
Mouse   264 RTGCSSYCGQE---AEQDRVVLKRVLLAYARWNKNVGYCQGFNILAALILEVMEGNEGDALKIMI 325

  Fly   760 ALMYDYGLRDLYKA-GFEVLYLRLYQLERLIKDQLPKLHEHF----------TACGIE---THMY 810
            .|: |..|.:.|.. ....|.:.:.....|::.:||:|.:|.          :..|.|   |:::
Mouse   326 YLI-DKVLPESYFVNNLRALSVDMAVFRDLLRLKLPELSQHLDTLQRTANKESGGGYEPPLTNVF 389

  Fly   811 ASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTL-------LSICE-SDLRQLDFEGIL 867
            ..||||||:....|...|..:.|....:|..::.:|::.:       :..|| :|    :|.|.:
Mouse   390 TMQWFLTLFATCLPNHTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECCETAD----EFYGTM 450

  Fly   868 KYFRVT---LPKKCRSSSQARKVMKQACERKIKKLKQYEEEFL--------------LKKQHKER 915
            .  |:|   |.:....|.:..:.:.........:|.:..|::.              :..:|.:.
Mouse   451 G--RLTQEMLEQDLLQSHELMQTVYSMAPFPFPQLAELREKYTYNITPFPATIKPTSVSGRHSKA 513

  Fly   916 LEKEAQIYENRFGEERRKMQA-------------EIDALNKQLTSAKERAVEKEKKHTGIIQ--- 964
            .:.:.   ||...:|.....|             |:....||:   ||...|:..:...|.:   
Mouse   514 RDSDD---ENGPDDEDAVASAVGCLGPLSGLLAPELQKYQKQI---KEATEEQTLRSNNIAELSP 572

  Fly   965 --------EY-----KQIIQRQEQDMNTLSETLGKV-------MHMVSNCQDCQQQIDAG----- 1004
                    ||     ..:::|...|:|.|.....::       :|.|......:::.|.|     
Mouse   573 GAINSCRSEYHAAFNSMMMERMTTDINALKRQYSRIKKKQQQQLHQVYIRAGSKEEQDLGFYLGP 637

  Fly  1005 NDNAKSDDG---------------------------KNRGQTDAMRNANEHPLGPLDP------- 1035
            .:.|..|.|                           .||...:|:.:...||.|.:.|       
Mouse   638 EEQAVDDKGPVTSILPSQANSSPVINHLLLGKKMKITNRAAKNAVIHVPGHPGGKISPVPYEDIK 702

  Fly  1036 --LNAA-SQRIRELELELAQAK----------LAQVEAE-CKNQDLNHQLSNTLSELQTNRNSWQ 1086
              ||:. ...||..:..:.:.|          |.:.::| ||...|     ....|..:.|.   
Mouse   703 TKLNSPWRTHIRVHKKNMPRTKSHLGCGDTVGLIEEQSEGCKASSL-----GAAEEFPSGRT--- 759

  Fly  1087 PWLSKTFNSLQEKVTTRG-GHRDNGSGGPMPSFQSYMGQAPTTLSEASSPS---GNQEYKTFAF- 1146
                         ||... |...:|.||         |..|.|: |..||.   |:.:....|. 
Mouse   760 -------------VTAHSEGSSGDGDGG---------GSTPRTI-EGQSPEPVFGDADVDVAAVQ 801

  Fly  1147 ------------ASVGGSPKL--PSKFQATKLRNSIDSLRNIV--VPLDTGKT 1183
                        |:....||:  |.:..|::|.::....:..:  :|..|.||
Mouse   802 VKLEALELNQRDAAAETEPKVHFPCQRHASELADAPGENQTAIKLLPGSTSKT 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 429..523 CDD:289256 1/3 (33%)
TBC 650..858 CDD:214540 62/244 (25%)
Phage_Gp23 <914..991 CDD:287621 18/112 (16%)
Tbc1d30XP_030101194.1 TBC 208..429 CDD:214540 60/231 (26%)
DUF4682 598..746 CDD:374060 25/147 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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