DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and TBC1D3H

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:XP_011523474.1 Gene:TBC1D3H / 729877 HGNCID:30708 Length:610 Species:Homo sapiens


Alignment Length:390 Identity:94/390 - (24%)
Similarity:155/390 - (39%) Gaps:85/390 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   555 NSID--------PSEEITEQPGHQQSSSLLKMGMNNLSRIVRSS-------SIASIEDDCPSD-- 602
            |::|        ||.|...|.|......:...|::......|:|       .:..::..|.|.  
Human    44 NNVDHLGIVQSCPSWESAPQEGPCPPFPVPSPGLSPELERDRASPFWGSAPRLGPLQAPCSSSAL 108

  Fly   603 ----YSSDGDEPLLSGTG-EVSKDCSQDTLDEWDPILREWDSEKRPKNLAPLVRLGVPEALREKI 662
                ||.....||.:... ::.::.|:.:  :|..:|.:|:..|..:.|......|:|..:|..:
Human   109 PGLPYSETELPPLTAREAKQIRREISRKS--KWVDMLGDWEKYKSSRKLIDRAYKGMPMNIRGPM 171

  Fly   663 WQKLANVEGRMEMND--KYKILITKETKCETVIQ---RDIHRTFPAHKCFKEIGGSGQDALFKVS 722
            |..|.|.| .|::.:  :|:|:..|..:....||   |||..|...|..|::..|:.|..|..:.
Human   172 WSVLLNTE-EMKLKNPGRYQIMKEKGKRSSEHIQRIDRDISGTLRKHMFFRDRYGTKQRELLHIL 235

  Fly   723 KAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVALMYD----------------YGLRDLY 771
            .||..::.|||||:.||.|||..||::||||||..||.|:..                .||:|  
Human   236 LAYEEYNPEVGYCRDLSHIAALFLLYLPEEDAFWALVQLLASERHSLQGFHSPNGGTVQGLQD-- 298

  Fly   772 KAGFEVLYLRLYQLERLIKDQLPKLHEH---FTACGIETHMYASQWFLTLYTARFPLCFVFHVLD 833
                        |.|.::....||...|   ...||..:.:..   .:.:......|.....:.|
Human   299 ------------QQEHVVATSQPKTMGHQDKKDLCGQCSPLGC---LIRILIDGISLGLTLRLWD 348

  Fly   834 VFLLDG----LPV------LFQVAVTLLSICES---------DLRQLDFEGILKYFRVTLPKKCR 879
            |:|::|    :|:      :.|..:|..|.|..         |....|.:.:||:.|.::.|..|
Human   349 VYLVEGEQALMPITRIAFKVQQKRLTKTSRCGPWARFCNRFVDTWARDEDTVLKHLRASMKKLTR 413

  Fly   880  879
            Human   414  413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 65/250 (26%)
SMC_prok_B <876..>1087 CDD:274008 2/4 (50%)
TPH <883..>977 CDD:464007
TBC1D3HXP_011523474.1 TBC 160..373 CDD:214540 62/230 (27%)
PHA03381 <417..>529 CDD:177618
Blue background indicates that the domain is not in the aligned region.

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