DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and Tbc1d2b

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_919315.2 Gene:Tbc1d2b / 67016 MGIID:1914266 Length:965 Species:Mus musculus


Alignment Length:753 Identity:150/753 - (19%)
Similarity:275/753 - (36%) Gaps:236/753 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 SVTSDVSGNPLNTAGYEFIVSLEIRERVAKNSYAAVPRDRGCFKLRANTDKEVCITVKQT----- 405
            :.:|..||.|...     :..::::.:..:.....:.:|       .::.||:...::||     
Mouse   326 ATSSGSSGGPTKP-----VPEMQLQIQSQQEELEQLKKD-------LSSQKELIRLLQQTVRSSQ 378

  Fly   406 --------------PSNVLQPLHIERCFGVLVAPGKLVVQKDMHLIDMHSMGYIQPGGTGVATES 456
                          |.:.|:.||                |||..::.:  .|.::..|    .|.
Mouse   379 YDKYFTNPQISQGVPGDTLELLH----------------QKDEQILGL--SGQLERFG----LEK 421

  Fly   457 DSNAQQSSSWPYTIRAEWKAQEKAFEQLNLESSKTNLTVAVDIVMRRIQEPVRFVIE-------- 513
            :|..|                    |...|:|....|...:.::|..||.....:|:        
Mouse   422 ESLQQ--------------------EVRTLKSKVGELNERLGMLMETIQAKDEVIIKLSACEGSV 466

  Fly   514 --------TPVTIQSASEMRIMDH-------------FMSKRPMTLRFYLHLKRTEESN-----W 552
                    :|:.|.::.:...:|.             |::|..:.|.   .|:|..|..     .
Mouse   467 SSPTLGPSSPLAIPASKDQLELDRLKDSLQGYKSQNKFLNKEILELS---ALRRNAERRERDLMA 528

  Fly   553 KVNSIDP---------------------SEEITEQPGHQQSSSLLKMGMNNLSR------IVRSS 590
            |.:|::.                     |||  :.|.....:.||:..:...|:      .|:..
Mouse   529 KYSSLEAKLCQVESKYLILLQEMKTPVCSEE--QGPARDVIAQLLEDALQVESQEQPEQAFVKPH 591

  Fly   591 SIASIE----DDCPSDYSSDGDEPL-------------LSGTGEVSKDCSQDTLDEWD-----PI 633
            .::..:    ...|.|   |.:|.|             |:...|||      |..:|:     .:
Mouse   592 LVSEFDIYGFRTVPDD---DEEEKLVAKVRALDLKTLYLTDNQEVS------TGVKWENYFASTM 647

  Fly   634 LREWDSEKRPKNLAPLVRLGVPEALREKIWQKLANVEGR-----MEMNDKYKIL----ITKETKC 689
            .||.......||   |:|.|:|...|.|:|:...:...|     || .|.::.|    :.|:...
Mouse   648 NREMACSPELKN---LIRAGIPHEHRSKVWKWCVDRHTRKFKDSME-PDYFQTLLQKALEKQNPA 708

  Fly   690 ETVIQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDA 754
            ...|:.|:.||.|.:|.:......|...|..|..|::..:.::||||||:.:.|..||::.:|||
Mouse   709 SKQIELDLLRTLPNNKHYSSPTSEGIQKLRSVLLAFSWRNPDIGYCQGLNRLVAVALLYLDQEDA 773

  Fly   755 FCVLVALMYDYGLRDLYK---AGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFL 816
            |..||.::..:..||.|.   .|.:| ..|:::  .|:.::||:||.||....::..:....|||
Mouse   774 FWCLVTIVEVFMPRDYYTKTLLGSQV-DQRVFR--DLLSEKLPRLHTHFEQYKVDYTLITFNWFL 835

  Fly   817 TLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQL-DFEGILKYFRVTLPKKCRS 880
            .::........:|.:.|.||.:|..|:|:.|:.|....|.::.:| |...|.||.|..    .|:
Mouse   836 VVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYF----TRT 896

  Fly   881 SSQARKVMKQACE-------RKIKKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERRKMQAEI 938
            ...|||::..:..       |:|:..:.|..|       |.|||                 ..|:
Mouse   897 ILDARKLISISFGDLNPFPLRQIRNRRAYHLE-------KVRLE-----------------LTEL 937

  Fly   939 DALNKQLTSAKERAVEKEKKHTGIIQEYKQIIQRQEQD 976
            :|:.:.....::.:.:|           .:::..:|:|
Mouse   938 EAIREDFLRERDTSPDK-----------GELVSDEEED 964

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599 27/180 (15%)
TBC 650..858 CDD:214540 63/219 (29%)
SMC_prok_B <876..>1087 CDD:274008 17/108 (16%)
TPH <883..>977 CDD:464007 16/101 (16%)
Tbc1d2bNP_919315.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
PH_TBC1D2A 36..144 CDD:269966
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..340 4/18 (22%)
CwlO1 345..>586 CDD:443091 43/294 (15%)
RabGAP-TBC 709..878 CDD:459855 51/171 (30%)
Blue background indicates that the domain is not in the aligned region.

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