DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and TBC1D8B

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_060222.2 Gene:TBC1D8B / 54885 HGNCID:24715 Length:1120 Species:Homo sapiens


Alignment Length:773 Identity:151/773 - (19%)
Similarity:267/773 - (34%) Gaps:271/773 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 CITVKQTPSNVLQP-LHIERCFGVLVAPGKLVVQKDMHLIDMHSMGYIQPGGTGVATESDSNAQQ 462
            |...:..|....:. |..|:|||:   |.|   :|   |:..:|..|                  
Human   130 CFAKEDDPEKFREALLKFEKCFGL---PEK---EK---LVTYYSCSY------------------ 167

  Fly   463 SSSWPYTIRAEWKAQEKAFEQLNLES-----------SKTNLTVAVDIVMRRIQEPVRFVIETPV 516
                       ||.:......|.|.:           |:..|.::.|.| .::::....::...:
Human   168 -----------WKGRVPCQGWLYLSTNFLSFYSFLLGSEIKLIISWDEV-SKLEKTSNVILTESI 220

  Fly   517 TIQSASEMRIMDHFMSKRPMTLRFYLHLKRT-----EESNWKVNSIDPSEEITEQPGHQQSSSLL 576
            .:.|..|    :|:.|       .:||:.:|     :.:|:.:..:...|.....|.......:.
Human   221 HVCSQGE----NHYFS-------MFLHINQTYLLMEQLANYAIRRLFDKETFDNDPVLYNPLQIT 274

  Fly   577 KMGMNNLS---------RIVRSSSIASIED---------------DCPSD-----YSSDGDE--- 609
            |.|:.|.:         |:.:..|:..:.:               .|.|:     .|.||::   
Human   275 KRGLENRAHSEQFNAFFRLPKGESLKEVHECFLWVPFSHFNTHGKMCISENYICFASQDGNQCSV 339

  Fly   610 --PL-----LSGTGEVSK----------------------------------------------- 620
              ||     :..|.:.||                                               
Human   340 IIPLREVLAIDKTNDSSKSVIISIKGKTAFRFHEVKDFEQLVAKLRLRCGAASTQYHDISTELAI 404

  Fly   621 --------------------DCSQ----------------DTLD-----------EWDPILREWD 638
                                :||:                :||:           .|..:..|..
Human   405 SSESTEPSDNFEVQSLTSQRECSKTVNTEALMTVFHPQNLETLNSKMLKEKMKEQSWKILFAECG 469

  Fly   639 ---SEKRPKNLAPLVRLGVPEALREKIWQKLANVEGRMEMNDKYKILITKET--KCETV---IQR 695
               |..|.|....||..|:||.||.::|...:.....|..|..|...:.:::  .|...   |:|
Human   470 RGVSMFRTKKTRDLVVRGIPETLRGELWMLFSGAVNDMATNPDYYTEVVEQSLGTCNLATEEIER 534

  Fly   696 DIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVA 760
            |:.|:.|.|..|:  ..:|..||.:|..|||..:.::||||.::.:.:.|||:..||:||.:|||
Human   535 DLRRSLPEHPAFQ--SDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA 597

  Fly   761 ----LMYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYAS---QWFLTL 818
                ::.||..|.:..|..:...     .|.||:|.||:|.||.|    :...::|   .|||||
Human   598 VCERMLPDYFNRRIIGALVDQAV-----FEELIRDHLPQLTEHMT----DMTFFSSVSLSWFLTL 653

  Fly   819 YTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCRSSSQ 883
            :.:..|:....:|:|.|..||:..:.|:.   |:|.:.:|.:|              ..|:..::
Human   654 FISVLPIESAVNVVDCFFYDGIKAILQLG---LAILDYNLDKL--------------LTCKDDAE 701

  Fly   884 ARKVMKQACERKIKKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERRKMQAEIDALNKQLTSA 948
            |...:.:..:....|              ...|....|...|...|:....:.:|..|.:: ::.
Human   702 AVTALNRFFDNVTNK--------------DSPLPSNVQQGSNVSDEKTSHTRVDITDLIRE-SNE 751

  Fly   949 KERAVEKEKKHTGIIQEYKQIIQRQEQDMNTLSETLGK-VMHMVSNCQDCQ---QQID 1002
            |...:..|..|:...:....:||       ||.||..: |:.:||  ||.:   |::|
Human   752 KYGNIRYEDIHSMRCRNRLYVIQ-------TLEETTKQNVLRVVS--QDVKLSLQELD 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 429..523 CDD:289256 13/104 (13%)
TBC 650..858 CDD:214540 68/219 (31%)
Phage_Gp23 <914..991 CDD:287621 16/77 (21%)
TBC1D8BNP_060222.2 PH-GRAM1_TBC1D8B 156..254 CDD:275419 21/144 (15%)
PH-GRAM2_TBC1D8B 296..388 CDD:270159 11/91 (12%)
TBC 486..694 CDD:214540 69/235 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1035..1066
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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