DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and wkd

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_650089.1 Gene:wkd / 41390 FlyBaseID:FBgn0037917 Length:363 Species:Drosophila melanogaster


Alignment Length:374 Identity:106/374 - (28%)
Similarity:172/374 - (45%) Gaps:40/374 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   580 MNNLSRIVRSSSIASIEDDCPSDYSSDG-----DEPL--LSGTGEVSKDCSQDTLDEWDPILREW 637
            |....|.:.:.|:.|....||......|     |:|.  ||....::::      .:|..::..|
  Fly     1 MATAPRSLDTISLCSTVSSCPDRNGFYGGFQRTDKPKEPLSKAQIIARE------KKWLYMIDNW 59

  Fly   638 D--SEKRPKNLAPLVRLGVPEALREKIWQKLANVEGRMEMN-DKYKILITKETKCETV--IQRDI 697
            .  ..|..|.:....|.|:|:::|.|.|..|:......:.| :.|..|:.|.....|:  |::|.
  Fly    60 SIYMSKNYKKIRDRCRKGIPKSVRPKAWFYLSGAYLLKKKNPNVYNELLEKPGNPTTIEEIKKDK 124

  Fly   698 HRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVALM 762
            ||.||.|:.|.:....||..||.|.|||::::.:||:||..:.|||.||:|:|.||||.|.|::.
  Fly   125 HRQFPFHEMFLDEQKVGQIELFNVLKAYSIYNPKVGFCQAQAPIAAFLLMHLPAEDAFWVFVSVC 189

  Fly   763 YDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCF 827
             |..|:|.:..|.||:......||.|:|...|.::.|.....:|..:|.:.|||...|...|...
  Fly   190 -DVYLQDYFIPGLEVIQNDAGILEGLLKKTCPPVYRHLQKHKVEPLLYMTDWFLCAMTRTLPWET 253

  Fly   828 VFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCRSSSQARKVMKQAC 892
            :..|.|.||.:|:.|:|:||:.::....|              |..:.|.|....:...|::...
  Fly   254 LLRVWDCFLAEGIRVIFKVALVIIGASLS--------------RHKVRKTCTGLCETLAVLRSPE 304

  Fly   893 ERKIKKLKQYEEEFLLKKQHKERLE-KEAQIYENRFGEERRKMQAEIDA 940
            |..:      ||||::....:..|. ::.||...|....|.|.:|:.:|
  Fly   305 EHIV------EEEFIINNMMRLNLRVEDFQIEHTRQKARRAKQKAQQEA 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 74/210 (35%)
SMC_prok_B <876..>1087 CDD:274008 16/66 (24%)
TPH <883..>977 CDD:464007 14/59 (24%)
wkdNP_650089.1 TBC 74..278 CDD:214540 73/204 (36%)
Blue background indicates that the domain is not in the aligned region.

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