DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and CG8155

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_611029.3 Gene:CG8155 / 36698 FlyBaseID:FBgn0034009 Length:1098 Species:Drosophila melanogaster


Alignment Length:885 Identity:160/885 - (18%)
Similarity:308/885 - (34%) Gaps:296/885 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 YTIRAEWKAQEKAFEQLNLESSKTNLTVAV------DIVMRRIQEPVRFVIETPVTIQSASE--- 523
            :.:::::..:.|||:....|     :.:||      |....||..         ::||:|||   
  Fly    48 FDVKSDFSIKYKAFDPAGNE-----IYLAVRSDWDLDAAFLRIHN---------ISIQTASEPCL 98

  Fly   524 -MRIMDHFMSKRPMTLRFYLHLKRTEESNWKVNSIDPSEEITEQPG------------------- 568
             ::|     ..:|.|:   :....||.|        |...||..|.                   
  Fly    99 TLQI-----DVKPFTV---VRECETEAS--------PGRSITGAPAPATPAPFVPARELMSPLQS 147

  Fly   569 ---------HQQSSSLLKMGMNNLSRIVRSSSIA----SIEDD-----------CPSDYSSDGDE 609
                     |.|:    |:|.:.|:::.::.||.    ::.::           |.|::     .
  Fly   148 LGVSQKYVQHMQT----KLGSSILNQMEKTFSIVQKAFNLSEEHMANLPPRPPMCDSEF-----R 203

  Fly   610 PLLSGTGEVSKDCSQDTLDEWDPILREWDSEKRPKNLAPLVRL-GVPEALREKIWQKLANV---- 669
            ..|...|::                      :|...|..::.| |:..:||..:|:.|.||    
  Fly   204 LFLDALGQI----------------------QRKDELHRVIFLGGIDPSLRRVVWKHLLNVYPGG 246

  Fly   670 ------EG--RME-----------MNDKYKILITKETKC------ETVIQRDIHRTFPAHKCFKE 709
                  :|  |||           :.|.:|..:.:.:..      .:::::|:.||...|..:  
  Fly   247 ANGLALDGHQRMEFMRRKSEQYCRLRDTWKAAVKRGSVAGELAYVTSMVKKDVLRTDRLHPFY-- 309

  Fly   710 IGGSGQD------ALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEED----AFCVLVALMYD 764
               :|.|      |||.:...||::...|.||||:|.||:.||:.|.:|.    .||.:::.|  
  Fly   310 ---AGSDDNQNIAALFNILTTYALNHPSVSYCQGMSDIASPLLVTMNDEAQAYICFCAIMSRM-- 369

  Fly   765 YGLRDLYKAGFEVLYLRLYQLERLIKDQL----PKLHEHFTACGIETHMYASQWFLTLYTARFPL 825
                   :..|.:..:.:.|....:.:.|    |:..|:..:...:..::..:|.|......|| 
  Fly   370 -------RGNFMLDGIAMTQKFAHLTEALSFYDPEFWEYLKSQQADDLLFCYRWLLLELKREFP- 426

  Fly   826 CFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLR-QLDFEGILKYFR--------VTLPKKCRSS 881
                              |:.|:.:|.:..|.|| :.|.|..|..|.        .::|....:.
  Fly   427 ------------------FEDALRMLEVQWSSLRYRCDGEKELALFEKEFVPITDASVPNSASTF 473

  Fly   882 SQARKVMKQACERKIKKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERRKMQAEIDALNKQLT 946
            |.:......:            ..:||.|..:....|...:       .|:...|.:.:|:..:.
  Fly   474 SSSYSATPTS------------PSYLLTKPRESPYTKVCAL-------RRQSSSASLSSLSSSVG 519

  Fly   947 SAKERAVEKEKKHT---GIIQEYKQIIQRQEQDMNTLSETL--GKVMHMVSNCQD-----CQQQI 1001
            ::......|...|:   .:.:......:||.:....:.::|  .|::.::....|     .:|.:
  Fly   520 TSHGLDNTKRLNHSLDDNMSRHATAAARRQRRTSAKVHQSLDESKMLALIEGALDNRNVKLEQNL 584

  Fly  1002 DAGNDNAKSDDGKNRGQTDAMRNANEHPLGPLDPLNAASQRIRELE----LELAQAKLAQVEAEC 1062
            .|| :..:.||..:|.::.:....|        |....:||..|.|    :...:|.|....:..
  Fly   585 SAG-EETEDDDVFDRKESPSFLETN--------PFKDDAQRAPERETTPPVSPGRAFLCSSSSSN 640

  Fly  1063 KNQD-------LNHQ----LSNTLS-ELQTNRNSWQPWLSKTFNSLQEKVTTRGGH--------- 1106
            .::|       |.|:    :||.:: :|.||       .|:...|::...|:.|||         
  Fly   641 LDEDPSDRKAKLQHKNIMTVSNIIAKQLATN-------ASQVSESMKRVSTSSGGHFKDLKEKLA 698

  Fly  1107 -------------RDNGSGGPMP----SFQSYMGQAPTTLSEASSPSGNQEYKTFAFASVGGSPK 1154
                         .|:|.....|    :|..::..|....:..|.....|..:|....|| ..|.
  Fly   699 ASSRIGISFDGEGEDDGDRKMPPKLVKNFNEFLNFATINKNRISDRFATQPQQTSGPISV-TKPV 762

  Fly  1155 LPSKFQATK--LRNSIDSLRNIVVPLD--TGKTLAENLKQ 1190
            :    |.||  :.:|:|...:..:|..  :..|.|..::|
  Fly   763 V----QLTKSGMGSSLDESDSSSLPETSWSASTAATTIQQ 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 429..523 CDD:289256 12/60 (20%)
TBC 650..858 CDD:214540 53/251 (21%)
Phage_Gp23 <914..991 CDD:287621 10/81 (12%)
CG8155NP_611029.3 TBC 225..439 CDD:214540 51/246 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456589
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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