DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and Tbc1d10a

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001015022.1 Gene:Tbc1d10a / 360968 RGDID:1311641 Length:505 Species:Rattus norvegicus


Alignment Length:468 Identity:117/468 - (25%)
Similarity:199/468 - (42%) Gaps:101/468 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   544 LKRTEESNWKVNSIDPSEEITEQPGHQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYSSDGD 608
            |..|.||..:......::|::......:::...:..::....||.|.......::.|.:.....:
  Rat    19 LSGTRESLAQGPDAATADELSSLGSDSEANGFAERRIDKFGFIVGSQGAEGALEEVPLEVLRQRE 83

  Fly   609 EPLLSGTGEVSKDCSQDTLDEWDPILREWDSEKRPKNLAPLVRL----GVPEALREKIWQKLANV 669
            ...|            |.|:.||    :|.::|..|     :||    |:|.:||.:.||.|:..
  Rat    84 SKWL------------DMLNNWD----KWMAKKHKK-----IRLRCQKGIPPSLRGRAWQYLSGG 127

  Fly   670 EGRMEMN-DKYKILITK--ETKCETVIQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSE 731
            :.:::.| .|:..|...  :.|...||:||:||.||.|:.|...||.||..||:|.|||.::..|
  Rat   128 KVKLQQNPGKFDELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAYTLYRPE 192

  Fly   732 VGYCQGLSFIAASLLLHMPEEDAFCVLVALMYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKL 796
            .||||..:.|||.||:|||.|.||..||.:...| |...|....|.:.|....|..|::...|..
  Rat   193 EGYCQAQAPIAAVLLMHMPAEQAFWCLVQVCEKY-LPGYYSEKLEAIQLDGEILFSLLQKVSPVA 256

  Fly   797 HEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQL 861
            |:|.:...|:..:|.::||:..:....|...|..|.|:|..:|:.::|:|.:.||.         
  Rat   257 HKHLSRQKIDPLLYMTEWFMCAFARTLPWSSVLRVWDMFFCEGVKIIFRVGLVLLK--------- 312

  Fly   862 DFEGILKYFRVTLPKKCRSSSQARKVMKQACERKIKKLKQ--------YEEEFLLKK-----QHK 913
                    ..:..|:|.|           ||:.:.:.::|        .:|.||:::     ..:
  Rat   313 --------HALGSPEKLR-----------ACQGQYETIEQLRSLSPKIMQEAFLVQEVIELPVTE 358

  Fly   914 ERLEKEAQIYENRFGEERRKMQ-----------AEIDA-----------------LNKQLTSAK- 949
            .::|:|..|...|:.|.|.:::           |.:||                 .:..|.|:| 
  Rat   359 RQIEREHLIQLRRWQETRGELECRSPPRMHGAKAILDAEPGPRPALQPSPSIRLPPDAALPSSKT 423

  Fly   950 --ERAVEKEKKHT 960
              .:..:||:|.|
  Rat   424 KPHKQAQKEQKRT 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 75/214 (35%)
SMC_prok_B <876..>1087 CDD:274008 24/129 (19%)
TPH <883..>977 CDD:464007 22/122 (18%)
Tbc1d10aNP_001015022.1 TBC 110..313 CDD:214540 73/220 (33%)
PHA03247 <377..500 CDD:223021 10/60 (17%)
Blue background indicates that the domain is not in the aligned region.

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