DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and Tbc1d15-17

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_608503.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster


Alignment Length:711 Identity:133/711 - (18%)
Similarity:238/711 - (33%) Gaps:243/711 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   435 HLIDMHSMGYI---------------------QPGGTGVATESDSNAQQSSSWPYTIRAEWKAQE 478
            |:.|:::.|.:                     ||..: :....||  |....|....|...:.:.
  Fly    57 HIADLNTSGSLSLVEYSRSIAEMPRRRLLLEWQPNDS-IMIADDS--QDQGDWALVDRISGRTRT 118

  Fly   479 ----KAFEQLNLESS----------KTNLTVAVDIVMRRIQEPVRFVIETPVTIQSASEMRIMDH 529
                :||....:|.|          :..|.....:.:|...:.:||:.:....:.|....:..:.
  Fly   119 TSECRAFNTRPIEPSGGATTRSRVMRAQLEDLSSVEVRHRGQTIRFMRKGANGVHSEFFFQHGNA 183

  Fly   530 FMSKRPMTLRFYLHLKRTEESNWKVNSIDPSEEITEQPGHQQSSSLLKMGMNNLSRIVRSS---- 590
            .:..|.|..:..:....|..|..:|.:|    ..||....:::.:.|.:|....|::.|.|    
  Fly   184 DLFVRSMRDQHLIENAETSRSGGEVYAI----LTTENQKLKKTFAELDIGQIKASQLPRESWLPN 244

  Fly   591 SIASIEDDCPSDY------SSDGDEP--LLSGTGEVSKD--------------CSQ--------- 624
            .:|.|..:.| ||      .|....|  |:||..:.|.|              ||.         
  Fly   245 KLAGILGNIP-DYVQPPFQRSPKSRPGVLISGDRQTSPDNYQIIGLSGSTNSACSSNGQSRGGSA 308

  Fly   625 ---------DTLDEWD-----------------PILR-EW----------DSEKRPKNLAPLVRL 652
                     :||:..|                 |:.. :|          ....|.|.|  :.|.
  Fly   309 EKSPADSELETLNAQDEKIVNNLPDRQRVERGHPLTETQWLEFQTPDGRISDSARIKEL--IFRG 371

  Fly   653 GVPEALREKIWQKLAN-----------VEGRMEMNDKYK------ILIT----------KETKCE 690
            ||.::||.::|:.|.|           :|.|.:.:.:|.      :.:|          :|.||:
  Fly   372 GVVQSLRPEVWKFLLNYYLWSDTHVERIERRKQKSIEYYNMKAQWLAMTTTQEANFCGYRERKCQ 436

  Fly   691 TVIQRDIHRTFPAHKCFKEIGGSGQD-----ALFKVSKAYAVHDSEVGYCQGLSFIAASLL-LHM 749
              |::|:.||..:.:.|     :|:|     .|..:...|.:::.::||.||:|.:.|.:| :.:
  Fly   437 --IEKDVKRTDRSLQFF-----AGEDNPNLTLLQGILMTYVMYNFDLGYVQGMSDLLAPILEIQV 494

  Fly   750 PEEDAFCVLVALMYDYGLRDLYKAGFEV----LYLRLYQLERLIKDQLPKLHEHFTACGIETHMY 810
            .|.|.|...|      |..:|....|::    :..:..|:.|||:.....|..:..:...:...:
  Fly   495 NEVDTFWCFV------GFMELVFTNFDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYF 553

  Fly   811 ASQWFLTLYT----------------ARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLR 859
            ..:|.|..|.                .|.| |..||           :||.||     |.:.:.|
  Fly   554 CFRWLLVWYKRELNSEDVLKLWECLWTRLP-CPNFH-----------LLFSVA-----ILDQETR 601

  Fly   860 -----QLDFEGILKYFRVTLPKKCRSSSQARKVMKQACERKIKKLKQYEEEFLLKKQHKERLEKE 919
                 |.:|..|||:                 |.:.:....::|..|..|...|:.:..|.|..:
  Fly   602 VIIDSQYEFTEILKH-----------------VNELSGNIDVQKTLQVAEGIYLQLKGSETLPND 649

  Fly   920 ---------------AQIYENRFGEERRKMQAEIDALNKQLTSAKERAVEKEKKHTGIIQE 965
                           .:|......||........|.|.|:||.      |::.:...:::|
  Fly   650 IRSIIGEPLLPAAAGEEIDGGMVDEEPTYSDDGFDELVKELTP------EEKVRQQALLEE 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599 19/122 (16%)
TBC 650..858 CDD:214540 56/260 (22%)
SMC_prok_B <876..>1087 CDD:274008 17/105 (16%)
TPH <883..>977 CDD:464007 17/98 (17%)
Tbc1d15-17NP_608503.1 TBC 369..598 CDD:214540 56/258 (22%)
Blue background indicates that the domain is not in the aligned region.

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