DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and CG1695

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster


Alignment Length:1170 Identity:217/1170 - (18%)
Similarity:349/1170 - (29%) Gaps:422/1170 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSTKSSESSITTSGEYEIVTDSNVASP------------MEQVKQVVNQEGTQPEVGGKPPTSLS 57
            |..:.::.|...||:....:..::..|            :..:..|.|..|..|..||.....|.
  Fly   111 LELELAQESHAVSGKRSSCSSDSIIKPKLLSKGSGSSNSVTTINTVTNGAGAGPGGGGGASAPLG 175

  Fly    58 -----ALAL-------------SSPEAGGDRSPTL-DMAHNRNLSDM---------------QHE 88
                 .|||             |:..:..||...: |..:...||.:               .|.
  Fly   176 KYLWIRLALHEKRLAKIIEHLVSNANSYYDREALVADPDYGSILSSLLVGPCALEFTRAKTADHY 240

  Fly    89 MTDALKDLELERGVAASGEKSAQRLPSHQQKSLTLPLTGSGGGSVDPEMRFPCTLFTPKSEETLD 153
            .:|...|..::|...:||.:             |.|.|..      |.:.|..:|.|     :.:
  Fly   241 WSDPCADELVQRHRISSGNR-------------TPPTTHR------PIINFKRSLHT-----SSE 281

  Fly   154 DASSSNRVGHSVFYDCIDASPACVEEKQDAMKPEKGDTT-----------DEEVSEIDQGCTIFS 207
            |.||.:      |..|   |||.|.:.......:...||           .::|||...|     
  Fly   282 DTSSGS------FKAC---SPASVAKDYVESLHQNSRTTLLYGKNNVLVLPKDVSEPMPG----- 332

  Fly   208 GVTYLGA-ANINAPKSETEVYRIMGELNSGSK-------SVGLKITVSIPNCSEGLVVLHDAES- 263
               ||.. .:|.:...:....::|...|.|..       |..|.|.|      :.:|.:|..:: 
  Fly   333 ---YLSLHQSIQSLTIKWTPNQLMNGYNDGDGGDKSFYWSYALNINV------DEIVYVHCHQNR 388

  Fly   264 -----NTIIATYEISSIILYYRGPVDTVENGCFAFTWLHGDALFQC------------------- 304
                 .|||...:..    ..|.|:...|.|       |..|...|                   
  Fly   389 GGDTGGTIILVGQDG----VQRPPIHFPEGG-------HLQAFLSCLETGLLPHGQLDPPLWSQR 442

  Fly   305 ---HVF------RCHIPEAVNQ-----------------VSACFQKAFQTYPPSM---------- 333
               .:|      |.||..:|.:                 ||.|..:.|....|.:          
  Fly   443 GIGKLFPWPKSVRRHILPSVMEAGGSVTDETPIDYVFRVVSKCQHEEFLASHPILELGRSSPRRK 507

  Fly   334 ---SCSLNSAVDMAN-SVTSDVSG--NPL----NTAGYEFIVSLEIRERVAKNSYAAVPRDRGCF 388
               |||...:.|.:: |::.|.|.  .||    .:...|.:.|...|:.:::..|..:...|...
  Fly   508 HLGSCSTTGSSDCSSKSLSIDQSSCETPLIQASQSTSIELVCSTMRRQIISRAFYGWLAYCRHLS 572

  Fly   389 KLRANTDKEVCITVKQTPSNVLQPLHIERCFGVLVAP------GKL-------VVQKDMHLIDMH 440
            .:|.:                |..|...|....|.|.      ||.       ||..|:.|..:.
  Fly   573 TVRTH----------------LSGLVNGRIMPDLAADEEGLTRGKWLAMHEDGVVTGDLELYRLV 621

  Fly   441 SMGYIQPGGTGVATESDSNAQQSSSWPY--------------------------TIRAEWKAQEK 479
            ..|.::|            ..:...|||                          |..:||.|.|.
  Fly   622 YFGGVEP------------ELRKEVWPYLLGHYDFGSTPEERKKQDETCKHYYETTMSEWLAVEA 674

  Fly   480 AFEQLNLESSKTNLTVAVDIVMRRIQEPVRFVIETPVT------IQSASEMRIMDHFMSKR---- 534
            ...|  .|..||.|.||     :...|..|.......:      :.:.|:...::|...:.    
  Fly   675 IVRQ--REKEKTALAVA-----KLSAEQARLAANATSSSNPHQKLANGSQQLQLEHGNGEEDQEN 732

  Fly   535 ---------------------PMTL----RFYLHLKRTEESNWKVNSIDPSEEITEQPGHQQ--- 571
                                 |..|    ......:..|:||.:....:..|:..:|..|.|   
  Fly   733 LVLDEGENDVFDDNDFSDISDPGDLFDEPELGQEAEEQEQSNLEEEVFEKQEDEEDQEDHDQREM 797

  Fly   572 ---SSSL----------------------------LKMGMNNLSRI----VRSSSIASI------ 595
               |..|                            |.:|:::...|    ::||...|.      
  Fly   798 PRLSEKLVLEFQNIDNMEPLRLQENCFADSETENDLGLGLDSSGNILMLSIKSSPSTSSYETVGN 862

  Fly   596 -----------EDDCPSDYSS--DGDEPLLSGTGE-----------VSKDCSQDTLDEWDPILRE 636
                       |::.|...|.  ..|:..|....|           :::..|.|.||: || ..|
  Fly   863 EFLDMAEAKLEEEEPPGQLSKFHSADDVRLDNQDEEESSQPATAVIITEAASLDALDD-DP-TEE 925

  Fly   637 WDSEK----RPKN-----LAPLVRLGVPEALREKIWQKLANVEGRMEMNDKYKILITKETKCET- 691
            :.|.|    .|.|     :|.|      :||:|   .|.|.|.........|.:.:.::..... 
  Fly   926 FTSRKTSLMSPLNEDITVVASL------DALQE---PKSACVSPASSNGGVYSVELLEQFGLNLH 981

  Fly   692 VIQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEE---- 752
            .|::|:.|   ..:.:........|.|..|...|.....:|||.||:..:.|.||:...:|    
  Fly   982 RIEKDVQR---CDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSY 1043

  Fly   753 DAFCVLVALMYDY----GLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMY-AS 812
            ..||.|:..|.:.    |..|::.|          .:..||:....::::...:.|..||.| ..
  Fly  1044 SCFCKLMERMIENFPSGGAMDMHFA----------NMRSLIQILDSEMYDLMDSNGDYTHFYFCY 1098

  Fly   813 QWFLTLYTARFPLCFVFHVLDVF-----LLDGLPVLFQVAVTLLSICESDL--RQLDFEGILKYF 870
            :|||..:........||...:|.     :..|..||| :|:.||......:  ..:||..::|:|
  Fly  1099 RWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF-LALALLETYRDIILSNSMDFTDVIKFF 1162

  Fly   871  870
              Fly  1163  1162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 31/186 (17%)
DUF3694 429..523 CDD:289256 23/125 (18%)
TBC 650..858 CDD:214540 49/222 (22%)
Phage_Gp23 <914..991 CDD:287621
CG1695NP_728346.2 RUN 63..237 CDD:280855 21/125 (17%)
PH_RUTBC 310..485 CDD:275431 35/199 (18%)
SRP68-RBD <648..>713 CDD:304552 14/71 (20%)
TBC 947..1124 CDD:214540 43/198 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456586
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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