DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GAPcenA and Evi5l

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_001418968.1 Gene:Evi5l / 304201 RGDID:1561962 Length:815 Species:Rattus norvegicus


Alignment Length:587 Identity:174/587 - (29%)
Similarity:291/587 - (49%) Gaps:67/587 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 TEESNWKVNSIDPSEEITEQPGHQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYSSDGDEPL 611
            ::..|...:.::...::.||....::.|.....||...|...||.::|      |..||:     
  Rat    30 SDSENLSPDELELLAKLEEQNRLLEADSKSMRSMNGSRRNSGSSLVSS------SSASSN----- 83

  Fly   612 LSGTGEVSKDCSQDTLDEWDPILREWDSEKRPKN--LAPLVRLGVPEALREKIWQKLANVEGRME 674
            ||       ...:||...|..|..||:..:|.|.  |..|:|.|:|...|..:||.|.:... |.
  Rat    84 LS-------HLEEDTWILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATD-MP 140

  Fly   675 MNDKYKILITKETKCETVIQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLS 739
            :.::|..|:...:.||.:|:|||.||:|.|:.||.....||:.||.|.|||::.|.|||||||.:
  Rat   141 VKNQYSELLKMSSPCEKLIRRDIARTYPEHEFFKGQDSLGQEVLFNVMKAYSLVDREVGYCQGSA 205

  Fly   740 FIAASLLLHMPEEDAFCVLVALMYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACG 804
            ||...||:.||||:||||.|.||.:|.||:|:|.....|.|.:||.|.::::|||.|:.||.:..
  Rat   206 FIVGLLLMQMPEEEAFCVFVRLMQEYRLRELFKPSMAELGLCIYQFEYMLQEQLPDLNTHFRSQS 270

  Fly   805 IETHMYASQWFLTLYTARFPLCFVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKY 869
            ..|.||||.|||||:...|||.....|.|:|:.:||.::|:|.:.||.:.:::|.|||.||:.:|
  Rat   271 FHTSMYASSWFLTLFLTTFPLPVATRVFDIFMYEGLEIVFRVGLALLQVNQTELMQLDMEGMSQY 335

  Fly   870 FRVTLPKKCRSSSQARKVMKQACERKI--KKLKQYEEEFLLKKQHKERLEKEAQIYENRFGEERR 932
            |:..:|.:..|...  |::.:|.:.|.  ||:|:.|:|:...|..    |.|.||...|...|.|
  Rat   336 FQRVIPHQFDSCPD--KLVLKAYQVKYNPKKMKRLEKEYAAMKSK----EMEEQIEIKRLRTENR 394

  Fly   933 KMQAEIDALNKQLTSAKERAVE------KEKKHTGIIQEYKQIIQRQ----EQDMNTLSETLGKV 987
            .::..|:.|.|:..:..:|.::      :|.:...:|:....::::|    .:|:.....|:.::
  Rat   395 LLKQRIETLEKESAALADRLIQGQVTRAQEAEENYVIKRELAVVRQQCSSTAEDLQKAQSTIRQL 459

  Fly   988 MHMVSN---CQDCQQQIDAGNDNAKSDDGKNRGQTDAMRNANEHPLGPLDPLNAA---SQRIREL 1046
            .....|   .:|....::...:.::..:.:..|   |:|...:..| .::..|::   ...:..|
  Rat   460 QEQQENPRLTEDFVSHLETELEQSRLRETETLG---ALREMQDKVL-DMEKRNSSLPDENNVARL 520

  Fly  1047 ELELAQAKLAQVEAECKNQDLNHQLSNTLSELQTNRNSWQPWLSK-----------TFNSLQEKV 1100
            :.||...|:.:.||....::|..|       ||...::||..:|:           ....||:::
  Rat   521 QEELKALKVREGEAVASARELKLQ-------LQELSDTWQAHVSRGGRWKESPRKLVLGELQDEL 578

  Fly  1101 TT 1102
            .|
  Rat   579 MT 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 377..523 CDD:463599
TBC 650..858 CDD:214540 91/207 (44%)
SMC_prok_B <876..>1087 CDD:274008 44/228 (19%)
TPH <883..>977 CDD:464007 23/105 (22%)
Evi5lNP_001418968.1 TBC 117..325 CDD:214540 91/208 (44%)
SMC_prok_B <381..719 CDD:274008 38/211 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.