Protein Alignment GAPcenA and Sgsm1

DIOPT Version :10

• Sequence 1: NP_001097549.1
• Gene: GAPcenA / 38945
• FlyBaseID: FBgn0035879
• Length: 1194
• Species: Drosophila melanogaster
• Sequence 2: XP_063127295.1
• Gene: Sgsm1 / 288743
• RGDID: 1308178
• Length: 1148
• Species: Rattus norvegicus
• Alignment Length: 526
• Identity: 101/526 - (19%)
• Similarity: 183/526 - (34%)
• Gaps: 135/526 - (25%)

  Fly   442 MGYIQPGGTGVATESDSNAQQSSSWPYTIRAEWKAQEKAFEQLNLES-----SKTNLTVAVDIVM 501
            :|:.|.|.|.: ...:.:.|..:.:..|: :||...|....|...||     :|.:...::|..:
  Rat   631 LGHYQFGMTEM-ERKEVDEQIHACYAQTM-SEWLGCEAIVRQRERESHAAALAKCSSGASLDSHL 693

  Fly   502 RRIQEPVRFVIETPVTIQSASEMRIMDHFMSKRPMTLRFYLHLKRTEESNWKV-NSIDPSEEITE 565
            .|       ::....||.:.|         |:...:.|..|.|:....|:.:| .|:|..|: ||
  Rat   694 HR-------MLHRDSTISNES---------SQSCSSGRQNLRLQSDSSSSTQVFESVDEVEQ-TE 741

  Fly   566 QPGHQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYS-----SDGDEPLLSGTGEVSKDCSQD 625
            ..|..:... .|:...|     .::...|.:...||.::     |:..||.||     ::|...|
  Rat   742 AEGRSEEKH-PKIPNGN-----PANGTCSPDSGHPSSHNFSSGLSEHSEPSLS-----TEDSVLD 795

  Fly   626 TLDEWDPILREWDSE---------KRPKNLAPLVRLGVPEALREKI------------------- 662
            .......:.|..||.         ...::.||...|.|.::|...:
  Rat   796 VQRSLPAVFRPGDSSVEDGQSSEATTSRDEAPREELAVQDSLESDLLANESLEEFMSIPGSLDVA 860

  Fly   663 -----------WQKLANVEGRMEMNDKY--------------KILITKETKCETV---------- 692
                       |...|:..||.:..|..              .:.:|.....||.
  Rat   861 LPEKDGAMMDGWPGEADKHGRADSEDNLSEEPEMESLFPALASLAVTSSANNETSPVSSSGVTYS 925

  Fly   693 -------------IQRDIHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAAS 744
                         |::|:.|...::..|.   .:..:.|..:..:|.....|:||.||:..:.|.
  Rat   926 PELLDLYTVNLHRIEKDVQRCDRSYWYFT---AANLEKLRNIMCSYIWQHIEIGYVQGMCDLLAP 987

  Fly   745 LLLHMPEED-AFCVLVALMYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKL-HEHFTACGIET 807
            ||:.:.:|. ||.....||........:....:..:..:..|.:::..:|.:| |::    |..|
  Rat   988 LLVILDDEALAFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMHQN----GDYT 1048

  Fly   808 HMY-ASQWFLTLYTARFPLCFVFHVLDVF-----LLDGLPVLFQVAVTLLSICESDL--RQLDFE 864
            |.| ..:|||..:........||.|.:..     :.....||| :|:.|:.:....:  ..:||.
  Rat  1049 HFYFCYRWFLLDFKRELVYDDVFSVWETIWAAKHVSSAHYVLF-IALALVEVYRDIILENNMDFT 1112

  Fly   865 GILKYF 870
            .|:|:|
  Rat  1113 DIIKFF 1118

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GAPcenA	NP_001097549.1	PTB_Rab6GAP	204..332	CDD:269922
		DUF3694	377..523	CDD:463599	17/85 (20%)
		TBC	650..858	CDD:214540	49/282 (17%)
		SMC_prok_B	<876..>1087	CDD:274008
		TPH	<883..>977	CDD:464007
Sgsm1	XP_063127295.1	None