DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and gyp51

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_594886.1 Gene:gyp51 / 2542680 PomBaseID:SPAC26F1.09 Length:1031 Species:Schizosaccharomyces pombe


Alignment Length:1200 Identity:246/1200 - (20%)
Similarity:410/1200 - (34%) Gaps:401/1200 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TKSSESSITTSGEYE---IVTDSNVASPMEQVKQVVNQEGTQPEVGGKPPTSL------------ 56
            |:::|..:.:|.|.|   |:.:.. |...|....:..::||    |..|..:.            
pombe     4 TEANEREVQSSYEKENVKIIREEE-AKDQESTDDIAVEDGT----GTSPDLNFFSTQNVMQMNFE 63

  Fly    57 ---SALALSSPEAGGDRS--------PTL-DM-------AHNRNLSDMQHEMTDALKDLEL-ERG 101
               |..:....||..|.|        |.: ||       :|::...:.|:..|:..:|..: |..
pombe    64 DEYSEFSNEDDEAEIDNSFADSIPNEPEIPDMQDEYSRDSHSQQSVEEQNNTTNTDEDASVNEFS 128

  Fly   102 VAA----------SGEKSAQRLPSHQQKSLTLPLTGSGGGSVDPEMRFPCTLFTPKSEETLDDAS 156
            |||          ...:|.:...:...::.||     |...|.....||        .|.||:..
pombe   129 VAADISDVNTLGKDNSESTEEPVNEVNETATL-----GNEDVGERSGFP--------SEGLDNEP 180

  Fly   157 SSNR----VGHSVFYDCIDASPACVE--EKQDAMKPEKGDTTD--------EEVSEID------- 200
            .|.|    .|:....|..|...:..|  |..|..:.|:..:.|        |:|:||:       
pombe   181 ESQRDLDETGNLAPEDLKDEVKSVHEFNEPNDLRQQEESYSDDDDTNVNEFEDVNEIENEHQLSV 245

  Fly   201 ----------QGCTIFSGVTYLG-AANI--------NAPKSETEVYRIMGELNSGSKSVGLKITV 246
                      :|..||.|....| .|:|        |.|.|:|              ..|.|.|.
pombe   246 ADEDQTSRLVKGKMIFVGKEDFGEEADISNSVFIEQNGPNSDT--------------VSGFKETS 296

  Fly   247 SIPNCS---EGLVVLHDAESNTIIATYEISSIILYYRGPVDTVENGCFAFTWLHGDALFQCHVFR 308
            ||.|.|   |...|..|::::|.|...|                                     
pombe   297 SIVNSSSTTEKPGVALDSQNDTSIFNEE------------------------------------- 324

  Fly   309 CHIPEAVNQVSACFQKAFQTYPPSMSCSLNSAVDMANSVTSD-----VSGNPLNTAGYEFIVSLE 368
                              ||         ||..:..|.:|.|     |...|:  ||.|      
pombe   325 ------------------QT---------NSLTETFNDLTLDHLPENVESEPV--AGKE------ 354

  Fly   369 IRERVAKNSYAAVPRDRGC----FKLRANTD----KEVCITVKQTPSNVLQPLHIERCFGVLVAP 425
              ...|||...|...|...    |.|:::.|    .|..|..:..|.....|        ::.:.
pombe   355 --NETAKNESGASDNDHKANVHVFVLKSSEDAITLNEEKIATQDDPLEAPTP--------IVASS 409

  Fly   426 GKLVVQKDMHLIDMHSMGYIQP---GGTGVATES---DSNAQQSSSWP--------------YTI 470
            ..:.:..:....::.:.|..:|   .||. :|.|   |:|...:|..|              .||
pombe   410 STIFLNSNQRNDELSASGSQEPHPKDGTN-STSSLPLDTNNLSNSEPPSHVLDASSETIEVIQTI 473

  Fly   471 RAEWKAQEKAFEQLNLESSKTN--LTVAVDIVMRRIQEPVRFV---IETPVTIQSASEMRIMDHF 530
            :   |.|.:..|.:..|..|.|  .:....:....::...|..   ..:|.:...:|.:..:.:.
pombe   474 K---KLQNQVPETIKDEVGKKNTAFSPGTSLSTNHVKTKSRSAHNNSTSPFSTAVSSWLNPLRYP 535

  Fly   531 MSKRPMTLRFYLHLKRTEESNW--KVNSIDPSE--EITEQPGHQQSSSLLKMGMNNLSRIVRSSS 591
            ..|.|..:..||      ||.:  |..||..::  ||.|.. ..|||::.......||..:::..
pombe   536 SDKSPRVISSYL------ESVFISKPRSIGDAQKLEILEYL-QSQSSTVSNQVFTLLSNFIQNPL 593

  Fly   592 IASIEDDCPSDYSSDGDEPLLSGTGEVSKDCSQDTLDEWDPILREWDSEKRPKNLAPLVRLGVPE 656
            .  :.|:|                           .||:             :|   |:.:....
pombe   594 F--VLDEC---------------------------FDEF-------------RN---LILMHNSH 613

  Fly   657 ALREKIWQKLAN-VEGRMEMNDKYKILITKETKCETVIQRDIHRTFPAHKCFKEIGGSGQDA--- 717
            .:...:|:.::: .....||  :|..|..|....:..|::|:.||| |.:.......:.|..   
pombe   614 TVHTVVWKTISSWTSYDYEM--QYSSLSIKNCDSDKAIRKDLDRTF-APEILSHFFSNRQQLEPT 675

  Fly   718 ---------LFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVALMYDYGLRDLYKA 773
                     |.:|.::.|:...:|||.||:|:||.:||:|:|...||.:||.|..:|.|::::.:
pombe   676 DNIAESTANLHRVLRSLAIVLPQVGYTQGMSWIAGALLMHLPAPQAFALLVFLFKNYHLQNIFSS 740

  Fly   774 GFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLD 838
            ....|...|:|..||::|.:|.|..||....|:|..|||:|||||:..:|||..|.|:.|:..|.
pombe   741 EMRGLSRVLHQFTRLVEDYMPSLAIHFKRQDIKTCSYASEWFLTLFAYKFPLEVVAHLYDILFLY 805

  Fly   839 GLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCRSSSQARK-----VMKQACERKIKK 898
            |..:||...:.|||..:..|.:|:.:.::.|.:..:....:.:.:...     .:|.|...:|:.
pombe   806 GPGILFNFGLALLSHSQESLLKLNMDRLISYLKEDIFLAFKETQEGENYDTSLFVKTAFSFEIQP 870

  Fly   899 --LKQYEEEF--LLKKQHKERLEKEAQIYENRFGE------------------------------ 929
              |.:|..|:  |||.:|:  |:...:...||...                              
pombe   871 DVLDRYGNEYDILLKSEHE--LDSSLEEMRNRHKSLNEHFIMLSDSMANLQVEHENMSALLLKEK 933

  Fly   930 --------ERRKMQAEIDALNKQLTSAK-------------------ERAVEKEKKHTGIIQEYK 967
                    |:..:::||.:||.||...|                   |..||.:.....|.::.|
pombe   934 MYLKNQTVEQASLKSEIASLNSQLAKQKSEIEQAFQGDMEAIIAENLEIMVESQSLEDEIFRKEK 998

  Fly   968 QI-----------------IQRQEQDMNTL 980
            |:                 :|:..|.||.:
pombe   999 QLAETKVNLAVLDEDHMMALQKWSQLMNRI 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 25/139 (18%)
DUF3694 429..523 CDD:289256 20/118 (17%)
TBC 650..858 CDD:214540 68/220 (31%)
Phage_Gp23 <914..991 CDD:287621 21/140 (15%)
gyp51NP_594886.1 COG5210 233..890 CDD:227535 176/813 (22%)
TBC 569..826 CDD:214540 79/305 (26%)
PspA 889..>1024 CDD:224755 18/136 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 109 1.000 Domainoid score I1618
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000497
OrthoInspector 1 1.000 - - otm47026
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1488
TreeFam 00.000 Not matched by this tool.
65.810

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