DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GAPcenA and RABGAP1

DIOPT Version :10

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_036329.3 Gene:RABGAP1 / 23637 HGNCID:17155 Length:1069 Species:Homo sapiens


Alignment Length:1191 Identity:429/1191 - (36%)
Similarity:618/1191 - (51%) Gaps:213/1191 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDNLST---KSSESSITTSGEYEIVTDSNVASPMEQVKQVVNQEGTQPEVGGKPPTSLSALALS 62
            |||..|.   ..|..|::|....:.|              :|:::|.:     .|.|:       
Human     1 MDDKASVGKISVSSDSVSTLNSEDFV--------------LVSRQGDE-----TPSTN------- 39

  Fly    63 SPEAGGDRSPTLDMAHNRNLSDMQHEMTDALKDLELERGVAASGEKSAQRLPSHQQKSLTLPLTG 127
              ....|....|.:..|.:...:|.|:.|.|.|..::   ...|||   .|....|      |.|
Human    40 --NGSDDEKTGLKIVGNGSEQQLQKELADVLMDPPMD---DQPGEK---ELVKRSQ------LDG 90

  Fly   128 SGGGSVDPEMRFPCTLFTPKSEETLDDASSSNRVGHSVFYDCIDASPACVEEKQDAMKPEKGDTT 192
            .|.|.:..::                .|||:           |:..|....:|.:...|.|....
Human    91 EGDGPLSNQL----------------SASST-----------INPVPLVGLQKPEMSLPVKPGQG 128

  Fly   193 DEEVSE-----IDQGCTIFSGVTYLGAANINAPKSETEVYRIMGELNSGSKSVGLKITVSIPNCS 252
            |.|.|.     .|:...:||.:||||.|::|||:||.|..|:|..|.|..: :.|.:|:|:||.|
Human   129 DSEASSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQ-ISLDVTLSVPNVS 192

  Fly   253 EGLVVLHDAESNTIIATYEISSIILYYRGPVDTVENGCFAFTWLHGDA-LFQCHVFRCHIPEAVN 316
            ||:|.|.|.::||.||.|.|..|:...||...|.|:.|||||..|.:| ||:.|||||.|.|||:
Human   193 EGIVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNAELFRIHVFRCEIQEAVS 257

  Fly   317 QVSACFQKAFQTYPPSMSCSLNSAVDMANSVTSDVSGNPLNTAGYEFIVSLEIRERVAKNSYAAV 381
            ::...|..||:........|..:|   ..:..||:         :.|.|||||:|...|..::||
Human   258 RILYSFATAFRRSAKQTPLSATAA---PQTPDSDI---------FTFSVSLEIKEDDGKGYFSAV 310

  Fly   382 P--RDRGCFKLRANTDKEVCITVKQTPSNVLQPLHIERCFGVLVAPGKLVVQKDMHLIDMHSMGY 444
            |  :||.|||||...||::.|.|:||.:   :.|.||||||:|::|||.|...||||:|:.||| 
Human   311 PKDKDRQCFKLRQGIDKKIVIYVQQTTN---KELAIERCFGLLLSPGKDVRNSDMHLLDLESMG- 371

  Fly   445 IQPGGTGVATESDSNAQQSSSWPYTIRAEWKAQEKAFEQLNLESSKTN---LTVAVDIVMRRIQE 506
                            :.|....|.|...|..:...|:.:|.|:.|..   :|.|||:|:..:||
Human   372 ----------------KSSDGKSYVITGSWNPKSPHFQVVNEETPKDKVLFMTTAVDLVITEVQE 420

  Fly   507 PVRFVIETPVTIQSASEMRIMDHFMSKRPMTLRFYLHLKRTEESNWKVNSIDPSEEIT--EQPGH 569
            ||||::||.|.:.|.:| |:...| |||..|..|:|.||:.::...| |:.|...|:.  |....
Human   421 PVRFLLETKVRVCSPNE-RLFWPF-SKRSTTENFFLKLKQIKQRERK-NNTDTLYEVVCLESESE 482

  Fly   570 QQSSSLLKMGMNNLSRIVRSSSIASIEDDCP-SDYSSDGDEPLLSGTGEVSKDCSQDTLDEWDPI 633
            ::..   |...:...|:.:|.|.:|:....| .|...|.|||||||:|:|||:|::..|:.|..:
Human   483 RERR---KTTASPSVRLPQSGSQSSVIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILETWGEL 544

  Fly   634 LREW--DSEKRPKNLAPLVRLGVPEALREKIWQKLANVEGRMEMNDKYKILITKETKCETVIQRD 696
            |.:|  :...|||.|:.|||.|||||||.::||.||.......:.:||:||||||:..::.|.||
Human   545 LSKWHLNLNVRPKQLSSLVRNGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKESPQDSAITRD 609

  Fly   697 IHRTFPAHKCFKEIGGSGQDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVAL 761
            |:||||||..||:.||.|||:|:|:.|||:|:|.|:|||||.||:||.||||||||.||.|||.:
Human   610 INRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKI 674

  Fly   762 MYDYGLRDLYKAGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLC 826
            |:|||||:|:|..||.|:.:.||||||:::.:|.|:.||....:|.|||||||||||:||:|||.
Human   675 MFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEAHMYASQWFLTLFTAKFPLY 739

  Fly   827 FVFHVLDVFLLDGLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCRSSSQARKVMKQA 891
            .|||::|:.|.:|:.|:|.||:.||...:.||...||||.||:|||.|||:.||...|:|:|:.|
Human   740 MVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGALKFFRVQLPKRYRSEENAKKLMELA 804

  Fly   892 CERKI--KKLKQYEEEFLLKKQHKERLEKEAQIYE--NRFGEERRKMQ----------------- 935
            |..||  ||||:||:|:     |..| |::||..:  .||..|.|::|                 
Human   805 CNMKISQKKLKKYEKEY-----HTMR-EQQAQQEDPIERFERENRRLQEANMRLEQENDDLAHEL 863

  Fly   936 ---------------AEIDALNKQLTSAKERAVEKE----------------------------K 957
                           .:.|||||:|...|::.::.|                            |
Human   864 VTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIK 928

  Fly   958 KHTGIIQEYKQII----QRQEQDMNTLSETLGKVMHMVSNCQDCQQQIDAGNDNAKSDDGKNRGQ 1018
            |::.||.:||||.    :|.|:........:.|:...|.:|:.|::..        :.:|:.:|.
Human   929 KNSSIIGDYKQICSQLSERLEKQQTANKVEIEKIRQKVDDCERCREFF--------NKEGRVKGI 985

  Fly  1019 TDAMRNANEHPLGPLDPLNAASQRIRELELELAQAKLAQVEAECKNQDLNHQLSNTLSELQTNRN 1083
            :......:|......:.|   ..::||:||||||.||..||||||.|||.|.|...|:|:|..:.
Human   986 SSTKEVLDEDTDEEKETL---KNQLREMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKK 1047

  Fly  1084 SWQPWLSKTFNSLQEKVTTRG 1104
            :   |.::|.:|::.....:|
Human  1048 T---WFNRTLSSIKTATGVQG 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922 60/128 (47%)
DUF3694 377..523 CDD:463599 59/150 (39%)
TBC 650..858 CDD:214540 118/207 (57%)
SMC_prok_B <876..>1087 CDD:274008 77/278 (28%)
TPH <883..>977 CDD:464007 42/161 (26%)
RABGAP1NP_036329.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79 20/108 (19%)
PTB_Rab6GAP 145..273 CDD:269922 60/128 (47%)
DUF3694 307..437 CDD:463599 59/149 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..527 15/47 (32%)
TBC 563..772 CDD:214540 119/208 (57%)
SMC_prok_B <825..>1032 CDD:274008 53/218 (24%)

Return to query results.
Submit another query.