DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPcenA and tbc-12

DIOPT Version :9

Sequence 1:NP_001097549.1 Gene:GAPcenA / 38945 FlyBaseID:FBgn0035879 Length:1194 Species:Drosophila melanogaster
Sequence 2:NP_508458.1 Gene:tbc-12 / 180556 WormBaseID:WBGene00044061 Length:614 Species:Caenorhabditis elegans


Alignment Length:509 Identity:116/509 - (22%)
Similarity:188/509 - (36%) Gaps:124/509 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 TIQSASEMRIMDHFMSKRPMTL---RFYLHLK------RTEESNWKV------------------ 554
            ::...||:...|...|| |.||   ||:...|      :.|:..||:                  
 Worm   150 SLDRRSELSDFDEPPSK-PETLSKSRFFNFPKNFFSRNKEEKHGWKMFGSRNKQSGVMATTGLIL 213

  Fly   555 ---NSIDPSEEITEQPGHQQSSSLLKMGMNNLSRIVRSSSIASIEDDCPSDYSSDGDEPLLSGTG 616
               .|..||:...|...|:|      |.::.|.:..:....|..|                    
 Worm   214 EERPSGLPSKSADEAAHHKQ------MYLDILEQAKKKEQRAEKE-------------------- 252

  Fly   617 EVSKDCSQDTLDE--------W-DPILREWDSEKRPKNLAPLVRLGVPEALREKIW--------- 663
            .:.....|..|:|        | :.||.:|:..|..|....|...|||..:|.::|         
 Worm   253 RLQAKAEQKRLEEQTAAHCRVWVEQILPKWEEMKDSKRCRELWWQGVPAKVRGELWFLTIGNQIE 317

  Fly   664 --------------QKLANVEGRMEMNDKYKILITKETKCETVIQRDIHRTFPAHKCFKEIGGSG 714
                          :|:|........|...:    |||.. |.|..|..|||.:...|:: .|..
 Worm   318 ITKELYDGLMDQAEEKIAKQLAEQNKNSAER----KETSV-TQIHLDATRTFTSLGMFQK-DGPY 376

  Fly   715 QDALFKVSKAYAVHDSEVGYCQGLSFIAASLLLHMPEEDAFCVLVALMYD-------YGLRDLYK 772
            .|.|.|:..|||:...::||.|.::||||.||:.|....|| :..|.:.|       :||:....
 Worm   377 YDHLLKLLSAYAILRPDIGYVQSMTFIAAVLLIQMDPYPAF-ISFANLLDRSLQSAFFGLKQPQM 440

  Fly   773 AGFEVLYLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLL 837
            ..:.:.|      :|.::.:||.||:|.....:...:|..:|...:|....||.....:.||:..
 Worm   441 TEYFIAY------DRYLEQELPALHQHLDKLDVRPDLYLIEWTFAMYAKSLPLDVTCRIWDVYFR 499

  Fly   838 DGLPVLFQVAVTLLSICESDLRQLDFEGILKYFRVTLPKKCRSSSQARKV---MKQACERKIKKL 899
            ||...||:.|:.:|.:.|..|..:||:..:: |...||.....:...|.:   |:.......:..
 Worm   500 DGEEFLFKAALGILRMYEPKLLTMDFDDCVE-FLTKLPNTLTGAELFRNIEPFMRPYNGESSRSK 563

  Fly   900 KQYEEEFLLKKQHKERLE-----KEAQIYENRFGEERRKMQAEIDALNKQLTSA 948
            |::.:.|   ::..||:.     ...||..|   .:..||...:....|.|.|:
 Worm   564 KRFSQIF---QEIDERVNPGGTTARTQITHN---VQELKMSKSLSGFIKDLLSS 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPcenANP_001097549.1 PTB_Rab6GAP 204..332 CDD:269922
DUF3694 429..523 CDD:289256 0/5 (0%)
TBC 650..858 CDD:214540 62/237 (26%)
Phage_Gp23 <914..991 CDD:287621 10/40 (25%)
tbc-12NP_508458.1 TBC 295..521 CDD:214540 62/238 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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