DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7083 and Phaf1

DIOPT Version :10

Sequence 1:NP_648211.1 Gene:CG7083 / 38943 FlyBaseID:FBgn0035877 Length:438 Species:Drosophila melanogaster
Sequence 2:NP_620609.2 Gene:Phaf1 / 207123 RGDID:621098 Length:422 Species:Rattus norvegicus


Alignment Length:436 Identity:230/436 - (52%)
Similarity:303/436 - (69%) Gaps:34/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLDLEIVPEISLGCDAWEFVLGMHFSQAIAIIQSQVGIIKGVQVLYSDTTPLGVDIIINLPQDGV 65
            |||||:|||.|||.:.|||.|||..:||:||:|....|||.||||||:.:||..|:|:||.|||:
  Rat     1 MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGI 65

  Fly    66 RLIFDPVSQRLKTIEVFNMKLVKLRYFGVYFNSPEVLPSIEQIEHSFGATHPGVYDAAKQLFALH 130
            :|:||..:||||.|||:::..|||:|.||:|||..:.|:||||:.||||||||||::|:|||.|:
  Rat    66 KLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLN 130

  Fly   131 FRGLSFYFPVDS-----KLHSGYAHGLSSLVFLNGASPVVSKMSLYAGSNVLENRVPSLPLSCYH 190
            ||||||.|.:||     |....:||||:||...:||:  |.:|.:|:|:::.:.:.|.:||||:.
  Rat   131 FRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGAT--VKRMYIYSGNSLQDTKAPMMPLSCFL 193

  Fly   191 RQMYLESATVLRTAFGHTKGLKLKLFTEGSGRAL--EPRRQCFTRELLFGDSCEDVATSLGAPNR 253
            ..:|.||..|||...| ..||:|:|...|.|..:  :.:.:.|.|.:.|||||:||.:.||:|::
  Rat   194 GNVYAESVDVLRDGTG-PSGLRLRLLAAGCGPGVLADAKMRVFERAVYFGDSCQDVLSMLGSPHK 257

  Fly   254 IFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTCKKFILHTNYPGHFNFNMY 318
            :|:||||||||||.|.::|..||.:|.||||||||:|:||||.|...|||:||||||||:|||:|
  Rat   258 VFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDANTHKVKKFVLHTNYPGHYNFNIY 322

  Fly   319 HRCEFQFLLQADHPSMSDSGHDLVTPTKQEHVN-----ITAYTKWDAISSALA-TSERPVVLHRA 377
            |||||:..|                ..|:|:..     .|.|:|||:|...|. ..|:||||||:
  Rat   323 HRCEFKIPL----------------AIKKENAGGQTEICTTYSKWDSIQELLGHPVEKPVVLHRS 371

  Fly   378 SSTNTANPFGSTFCYGYQDLIFEVMPNSHIASVTLYNTAPPRQPAH 423
            ||.|..||||||||:|.|.:|||||.|:||||||||  .|||..||
  Rat   372 SSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLY--GPPRPGAH 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7083NP_648211.1 PHAF1 15..413 CDD:461013 212/410 (52%)
Phaf1NP_620609.2 PHAF1 15..407 CDD:461013 212/410 (52%)

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