Protein Alignment Cpsf6 and AT5G55670

DIOPT Version :9

• Sequence 1: NP_648206.1
• Gene: Cpsf6 / 38937
• FlyBaseID: FBgn0035872
• Length: 652
• Species: Drosophila melanogaster
• Sequence 2: NP_200378.1
• Gene: AT5G55670 / 835661
• AraportID: AT5G55670
• Length: 710
• Species: Arabidopsis thaliana
• Alignment Length: 682
• Identity: 183/682 - (26%)
• Similarity: 237/682 - (34%)
• Gaps: 238/682 - (34%)

  Fly    39 PTESAASGG----------GGGGTPSADGAAGPGSGEPGERNSGGPNGVYHQSSGSLTPTMNRRY 93
            |.....:||          |.|...:..|..|.|:|      .||..|.:
plant   192 PVMGNVNGGIPPGPGSNMVGNGANIAMPGVVGGGTG------GGGGGGAF--------------- 235

  Fly    94 QLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRANGQSKGFSVISLGSESSLRAVLDQLPK 158
             |:||:|.|||||.::...|...|.  ::|||||:.:|:|:|||:..:......:..|..|.|..
plant   236 -LFVGDLHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGYCQVEFYDPVAASACKDALNG 297

  Fly   159 KEMHGQAPVVTYPSKQALTQFESLQKTRP------VPPPQQNGPPRGPAPP------------SM 205
            ...:|:..||.|.|..::.:....|..|.      :...::.||...|:.|            ::
plant   298 YPFNGRPCVVEYASPYSVKRMGEAQVNRTQQAQSVIAQAKRGGPADPPSKPLVANNNNNNNNNAI 362

  Fly   206 GGGPMPTGHPGGPQGGGPPGHPPRGMNSIMQPGQYRPQHMSQVPQVGGPNSGPPRMQPPMHPQGG 270
            ||     ...||...|...|:..|| |:....|:             || .||.|.:|......|
plant   363 GG-----NFQGGENRGFGRGNWGRG-NAQGMGGR-------------GP-GGPMRNRPNGMGGRG 407

  Fly   271 LMGNQQPPPRYPSAQGQWPGQRPGGPRPGPPNGPPQRPMFQ-----------GGPMGMPVRGPAG 324
            ||||                   ||...|...|||...|.|           ||||.
plant   408 LMGN-------------------GGFGQGMGTGPPMNMMHQPMMGQGFEQAFGGPMA-------- 445

  Fly   325 PDWRRPPMHGGFP----PQGPPRGL----PPAPGPGGPHGAPAPHVNPAFFNQPGGPAQHPGMGG 381
                |...:||||    ||.|  ||    ||..|.|.|  ..|||||||||.:        ||
plant   446 ----RMGGYGGFPGAPGPQFP--GLLSSFPPVGGVGLP--GVAPHVNPAFFGR--------GM-- 492

  Fly   382 PPHGAPGPQPGMNMPPQQGM----NMTPQHGPPPQFAQHGPRGPWPPPQGKPPGPFPDPQQMGPQ 442
                   |..||.|.|..|:    ||                |.|.|..|          ..|.
plant   493 -------PMNGMGMMPNAGVDGGHNM----------------GMWDPNSG----------GWGA- 523

  Fly   443 LTEVEFEEVMSRNRTVSSSAIARAVSDAAAGEY----------------SSAIETLVTAISLIKQ 491
                  .|.:...|...||....|.||...||.                :|..|...::....::
plant   524 ------GEDLGSGRAAESSYGEEAASDHQYGEVNHERGARPNPVKEKERASEREWSGSSDRRNRE 582

  Fly   492 SKVAHDERCKILISSLQDTLHGI---EAKSYNRRERSRSRERSHRSRQRRERSTSRYRERSRERE 553
            .|.|..||.   |...:|..||.   |.:..:.|:..|.|||.|..:. ||||....|:|.||||
plant   583 DKDAGYERD---IPREKDVGHGYDMPERRHRDDRDTGREREREHHHKD-RERSREHVRDRERERE 643

  Fly   554 RDRDR-ERERDGGSYRERSRSRERERQAPDHYRDDSRSVRPRKSPEPVVAEAAEAPSSKRYYEDR 617
            |||.| ||||.||.:      |.|.|..|:|   |....|.|.|
plant   644 RDRHREERERYGGDH------RTRHRDEPEH---DEEWNRGRSS--------------------- 678

  Fly   618 ERYRSSDRERRDRDRDRDRERERDRDRREEHR 649
               |..::.|..|: |..|.:.||.|..:..|
plant   679 ---RGHNKSRLSRE-DNHRSKSRDTDYGKRRR 706

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cpsf6	NP_648206.1	RRM_CFIm68	94..170	CDD:241087	27/75 (36%)
AT5G55670	NP_200378.1	RRM_CFIm68_CFIm59	236..309	CDD:409807	27/74 (36%)
		SF-CC1	562..>674	CDD:273721	43/124 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	49	1.000	Domainoid score	I4439
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	124	1.000	Inparanoid score	I1944
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm3145
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23204
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.150